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L2_039_000M1_scaffold_12

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Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_12_1
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(185..1051)
DNA (867bp) protein (289aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GSI2_9CLOT
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CDB17082.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
pyridine nucleotide-disulfide oxidoreductase
L2_039_000M1_scaffold_12_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1137..1445)
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MLZ3_9CLOT
trxA4; thioredoxin TrxA
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_039_000M1_scaffold_12_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1669..3120)
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Megasphaera RepID=S7HTV7_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_039_000M1_scaffold_12_4
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3104..3787)
DNA (684bp) protein (228aa)
Putative response regulator ArlR n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UK33_9FIRM
Putative response regulator ArlR {ECO:0000313|EMBL:ERT59249.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
DNA-binding response regulator
L2_039_000M1_scaffold_12_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4322..4486
DNA (165bp) protein (55aa)
Ferredoxin n=2 Tax=Megasphaera RepID=S7HK70_9FIRM
Ferredoxin {ECO:0000313|EMBL:EPP19070.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ferredoxin
L2_039_000M1_scaffold_12_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4869..5306
DNA (438bp) protein (146aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Lipoprotein signal peptidase n=2 Tax=Megasphaera RepID=S7HKG2_9FIRM
lipoprotein signal peptidase
L2_039_000M1_scaffold_12_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5314..6228
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Pseudouridine synthase n=2 Tax=Megasphaera RepID=S7HKC1_9FIRM
pseudouridine synthase
L2_039_000M1_scaffold_12_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6241..6783
DNA (543bp) protein (181aa)
Bifunctional protein PyrR n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNU1_MEGEL
bifunctional protein pyrR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_12_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6907..7860
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HKC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP19063.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_039_000M1_scaffold_12_10
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7974..10247
DNA (2274bp) protein (758aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ERT60621.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ERT60621.1};; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UMS5_9FIRM
hypothetical protein
L2_039_000M1_scaffold_12_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10498..11487
DNA (990bp) protein (330aa)
Dihydroxyacetone kinase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNU2_MEGEL
dihydroxyacetone kinase
Dihydroxyacetone kinase {ECO:0000313|EMBL:CCC73120.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_12_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11450..12121
DNA (672bp) protein (224aa)
Dihydroxyacetone kinase subunit L n=2 Tax=Megasphaera RepID=S7HK75_9FIRM
Dihydroxyacetone kinase subunit L {ECO:0000313|EMBL:EPP19065.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
dihydroxyacetone kinase
L2_039_000M1_scaffold_12_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12140..12514
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HKG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP19064.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_039_000M1_scaffold_12_14
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12923..14242
DNA (1320bp) protein (440aa)
Recombination factor protein RarA n=2 Tax=Megasphaera RepID=G0VNX4_MEGEL
recombination factor protein RarA
Recombination factor protein RarA {ECO:0000313|EMBL:CDF05576.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_12_15
Megasphaera micronuciformis, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14305..16962
DNA (2658bp) protein (886aa)
FtsK/SpoIIIE family protein n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZD06_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFQ03927.1}; TaxID=706434 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera micronuciformis F0359.;"
stage III sporulation protein E
L2_039_000M1_scaffold_12_16
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17062..17451
DNA (390bp) protein (130aa)
Conserved domain protein n=2 Tax=Megasphaera RepID=G0VNX6_MEGEL
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:CCC73154.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_12_17
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17462..19366
DNA (1905bp) protein (635aa)
UPF0313 protein MELS_0933 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNX7_MEGEL
hypothetical protein
UPF0313 protein MELS_0933 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_12_18
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19371..20417
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BL7 RepID=S7IYC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF05572.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L2_039_000M1_scaffold_12_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20421..21755
DNA (1335bp) protein (445aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYZ7_9FIRM
MiaB-like tRNA modifying enzyme YliG
L2_039_000M1_scaffold_12_20
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21770..23023
DNA (1254bp) protein (418aa)
Putative competence-damage inducible protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UIC2_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
competence-damage inducible protein
L2_039_000M1_scaffold_12_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


23027..24091
DNA (1065bp) protein (355aa)
Protein RecA n=2 Tax=Megasphaera RepID=S7HNT5_9FIRM
recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_039_000M1_scaffold_12_22
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24091..24519
DNA (429bp) protein (143aa)
Regulatory protein RecX n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0F6_9FIRM
regulatory protein recX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_12_23
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24741..26276
DNA (1536bp) protein (512aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Ribonuclease Y n=2 Tax=Megasphaera RepID=G0VNY3_MEGEL
hypothetical protein
L2_039_000M1_scaffold_12_24
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26480..27850
DNA (1371bp) protein (457aa)
HMGL-like protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR43_MEGEL
HMGL-like protein
HMGL-like protein {ECO:0000313|EMBL:CCC72288.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_12_25
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28017..29696
DNA (1680bp) protein (560aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CCC74055.1}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Formate--tetrahydrofolate ligase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VS15_MEGEL
formate--tetrahydrofolate ligase
L2_039_000M1_scaffold_12_26
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29705..30325
DNA (621bp) protein (207aa)
Formiminotransferase-cyclodeaminase n=2 Tax=Megasphaera RepID=S7HI04_9FIRM
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:EPP16354.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
formiminotransferase-cyclodeaminase
L2_039_000M1_scaffold_12_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30398..31063)
DNA (666bp) protein (222aa)
UPF0173 metal-dependent hydrolase MELS_1491 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQL2_MEGEL
hypothetical protein
UPF0173 metal-dependent hydrolase MELS_1491 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_12_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31189..31530
DNA (342bp) protein (114aa)
Cupin domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INS4_9CLOT
Cupin domain protein {ECO:0000313|EMBL:CCY43740.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mannose-6-phosphate isomerase
L2_039_000M1_scaffold_12_29
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31585..31980
DNA (396bp) protein (132aa)
Oxidoreductase n=3 Tax=Coprococcus RepID=A8SYB5_9FIRM
C_GCAxxG_C_C family probable redox protein
Oxidoreductase {ECO:0000313|EMBL:EDP25299.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
L2_039_000M1_scaffold_12_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32027..32176
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQR7_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73767.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying items 1-30 of 121 in total

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