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L2_039_000M1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_13_1
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34..2376)
DNA (2343bp) protein (781aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=G4Q4A5_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:AEQ21899.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
hypothetical protein
L2_039_000M1_scaffold_13_2
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3046..3789)
DNA (744bp) protein (248aa)
mtnN; nucleoside phosphorylase (EC:3.2.2.9)
Nucleoside phosphorylase n=4 Tax=Acidaminococcus RepID=G4Q4A3_ACIIR
Nucleoside phosphorylase {ECO:0000313|EMBL:AEQ21897.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_3
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3793..4515)
DNA (723bp) protein (241aa)
Secreted protein n=5 Tax=Acidaminococcus RepID=G4Q4A2_ACIIR
hypothetical protein
Secreted protein {ECO:0000313|EMBL:AEQ21896.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_4
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4746..5246)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=G4Q4A0_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21894.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_5
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5338..5664)
DNA (327bp) protein (109aa)
Thioredoxin n=5 Tax=Acidaminococcus RepID=G4Q499_ACIIR
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_6
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6066..6980)
DNA (915bp) protein (305aa)
Signal recognition particle receptor FtsY n=5 Tax=Acidaminococcus RepID=G4Q497_ACIIR
ftsY; signal recognition particle-docking protein ftsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_7
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6977..10537)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=3 Tax=Acidaminococcus RepID=G4Q496_ACIIR
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
chromosome segregation protein SMC
L2_039_000M1_scaffold_13_8
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10553..11107)
DNA (555bp) protein (185aa)
pyrR; pyrimidine regulatory protein pyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2W642_9FIRM
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L2_039_000M1_scaffold_13_9
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11120..12076)
DNA (957bp) protein (319aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
Pseudouridine synthase n=4 Tax=Acidaminococcus RepID=G4Q494_ACIIR
pseudouridine synthase
L2_039_000M1_scaffold_13_10
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12028..12483)
DNA (456bp) protein (152aa)
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Lipoprotein signal peptidase n=4 Tax=Acidaminococcus RepID=G4Q493_ACIIR
L2_039_000M1_scaffold_13_11
unknown

Not on your lists

12841..13059
DNA (219bp) protein (73aa)

This feature has no annotations

L2_039_000M1_scaffold_13_12
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13022..14812)
DNA (1791bp) protein (597aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase {ECO:0000313|EMBL:ERL20167.1}; EC=6.1.1.- {ECO:0000313|EMBL:ERL20167.1};; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
Aspartate--tRNA ligase n=5 Tax=Acidaminococcus RepID=G4Q491_ACIIR
L2_039_000M1_scaffold_13_13
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(14819..16081)
DNA (1263bp) protein (421aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Acidaminococcus RepID=R6MQ87_9FIRM
L2_039_000M1_scaffold_13_14
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16172..17242)
DNA (1071bp) protein (357aa)
PF01594 domain protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2UPM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEH90764.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
hypothetical protein
L2_039_000M1_scaffold_13_15
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17255..17878)
DNA (624bp) protein (208aa)
gloB; beta-lactamase (EC:3.1.2.6)
Beta-lactamase n=4 Tax=Acidaminococcus RepID=G4Q488_ACIIR
Beta-lactamase {ECO:0000313|EMBL:AEQ21882.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_16
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17892..18341)
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=Acidaminococcus RepID=G4Q487_ACIIR
D-tyrosyl-tRNA(Tyr) deacylase
L2_039_000M1_scaffold_13_17
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18351..20573)
DNA (2223bp) protein (741aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=3 Tax=Acidaminococcus RepID=R6M9V4_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CDB96413.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_13_18
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20587..22923)
DNA (2337bp) protein (779aa)
recJ; exonuclease recJ (EC:3.1.-.-)
Exonuclease recJ n=2 Tax=Acidaminococcus RepID=R6MK82_9FIRM
Exonuclease recJ {ECO:0000313|EMBL:CDB96414.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_13_19
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22935..23297)
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q484_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21878.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_20
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23389..24330)
DNA (942bp) protein (314aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q483_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21877.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_21
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24682..24954)
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q482_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB96426.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_13_22
unknown

Not on your lists

25050..25244
DNA (195bp) protein (65aa)

This feature has no annotations

L2_039_000M1_scaffold_13_23
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25357..26445)
DNA (1089bp) protein (363aa)
Permease n=4 Tax=Acidaminococcus RepID=G4Q481_ACIIR
permease
Permease {ECO:0000313|EMBL:AEQ21875.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_24
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26454..27173)
DNA (720bp) protein (240aa)
lptB; (unclassified) ABC transporter ATPase (EC:3.6.3.-)
ABC-type (Unclassified) transport system, ATPase component n=5 Tax=Acidaminococcus RepID=G4Q480_ACIIR
LPS ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERL20183.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L2_039_000M1_scaffold_13_25
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27188..28036)
DNA (849bp) protein (283aa)
OstA family protein n=5 Tax=Acidaminococcus RepID=G4Q479_ACIIR
OstA family protein
OstA family protein {ECO:0000313|EMBL:AEQ21873.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_26
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28037..28585)
DNA (549bp) protein (183aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q478_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21872.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_27
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28602..29471)
DNA (870bp) protein (290aa)
htrB; lipid A biosynthesis acyltransferase (EC:2.3.1.-)
Lipid A biosynthesis acyltransferase n=5 Tax=Acidaminococcus RepID=G4Q477_ACIIR
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEQ21871.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_28
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29471..30013)
DNA (543bp) protein (181aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=5 Tax=Acidaminococcus RepID=G4Q476_ACIIR
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:AEQ21870.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_13_29
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30014..30979)
DNA (966bp) protein (322aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q475_ACIIR
hypothetical protein
Sugar isomerase, KpsF/GutQ family {ECO:0000313|EMBL:EEH90778.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L2_039_000M1_scaffold_13_30
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30984..31805)
DNA (822bp) protein (274aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
2-dehydro-3-deoxyphosphooctonate aldolase n=2 Tax=Acidaminococcus RepID=G4Q474_ACIIR
Displaying items 1-30 of 118 in total

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