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L2_039_000M1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_18_1
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..292
DNA (291bp) protein (97aa)
Rubredoxin n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR94_MEGEL
rubredoxin
Rubredoxin {ECO:0000313|EMBL:EPP14759.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_039_000M1_scaffold_18_2
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(391..1071)
DNA (681bp) protein (227aa)
SNARE-like domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UAX8_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:ERT56466.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein
L2_039_000M1_scaffold_18_3
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1209..2003)
DNA (795bp) protein (265aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
tRNA pseudouridine synthase A n=2 Tax=Megasphaera RepID=G0VRA0_MEGEL
tRNA pseudouridine synthase A
L2_039_000M1_scaffold_18_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2000..2800)
DNA (801bp) protein (267aa)
Energy-coupling factor transporter transmembrane protein EcfT n=2 Tax=Megasphaera RepID=S7HGC8_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
cobalt transport protein
L2_039_000M1_scaffold_18_5
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2793..3659)
DNA (867bp) protein (289aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
ABC transporter n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRA2_MEGEL
ABC transporter
L2_039_000M1_scaffold_18_6
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3650..4471)
DNA (822bp) protein (274aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Cobalt ABC transporter n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRA3_MEGEL
cobalt ABC transporter
L2_039_000M1_scaffold_18_7
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4578..6680)
DNA (2103bp) protein (701aa)
Ferrous iron transport protein B n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MZY8_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CDF05427.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
ferrous iron transport protein B
L2_039_000M1_scaffold_18_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6677..6913)
DNA (237bp) protein (79aa)
FeoA domain protein n=2 Tax=Megasphaera RepID=G0VRA5_MEGEL
feoA domain protein
FeoA domain protein {ECO:0000313|EMBL:CCC72350.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_18_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6925..7479)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HLK4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPP14771.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_039_000M1_scaffold_18_10
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7623..8084
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=R7MW68_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF05429.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_18_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8200..9027)
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Undecaprenyl-diphosphatase n=2 Tax=Megasphaera RepID=S7HGJ9_9FIRM
undecaprenyl-diphosphatase
L2_039_000M1_scaffold_18_12
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9237..9701)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=R7MYK8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF05431.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_18_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9842..11170)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. NM10 RepID=S7IXV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14775.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_039_000M1_scaffold_18_14
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11248..12753)
DNA (1506bp) protein (502aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Lysine--tRNA ligase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UB14_9FIRM
lysyl-tRNA synthetase
L2_039_000M1_scaffold_18_15
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12773..13258)
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=2 Tax=Megasphaera RepID=D3LWW2_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1 str. 28L.;"
transcription elongation factor greA
L2_039_000M1_scaffold_18_16
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13401..14384)
DNA (984bp) protein (328aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CCC72358.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
tRNA-dihydrouridine synthase n=2 Tax=Megasphaera RepID=G0VRB3_MEGEL
tRNA-dihydrouridine synthase
L2_039_000M1_scaffold_18_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14368..15132)
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Type III pantothenate kinase n=2 Tax=Megasphaera RepID=S7HGY7_9FIRM
type III pantothenate kinase
L2_039_000M1_scaffold_18_18
Megasphaera sp. UPII 135-E, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15267..16235)
DNA (969bp) protein (323aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MPW3_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1000569 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. UPII 135-E.;"
biotin-(acetyl-CoA-carboxylase) ligase
L2_039_000M1_scaffold_18_19
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16408..18339)
DNA (1932bp) protein (644aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CCC72361.1}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N035_9FIRM
ATP-dependent zinc metalloprotease FtsH
L2_039_000M1_scaffold_18_20
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18473..19012)
DNA (540bp) protein (180aa)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Megasphaera RepID=S7HGD5_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EPP14782.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypoxanthine phosphoribosyltransferase
L2_039_000M1_scaffold_18_21
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19024..20409)
DNA (1386bp) protein (462aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UDG0_9FIRM
tRNA(Ile)-lysidine synthase
L2_039_000M1_scaffold_18_22
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20378..21292)
DNA (915bp) protein (305aa)
Ppx/GppA phosphatase n=2 Tax=Megasphaera RepID=S7HGZ0_9FIRM
Ppx/GppA phosphatase {ECO:0000313|EMBL:EPP14784.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Ppx/GppA phosphatase
L2_039_000M1_scaffold_18_23
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21399..21842)
DNA (444bp) protein (148aa)
General stress protein 13 n=4 Tax=Megasphaera RepID=S7HIE7_9FIRM
general stress protein 13
Putative general stress protein 13 {ECO:0000313|EMBL:CCC72365.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_18_24
Megasphaera micronuciformis, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21968..22303)
DNA (336bp) protein (112aa)
Septum formation initiator n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZBS4_9FIRM
Septum formation initiator {ECO:0000313|EMBL:EFQ04302.1}; TaxID=706434 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera micronuciformis F0359.;"
septum formation initiator
L2_039_000M1_scaffold_18_25
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22557..23963
DNA (1407bp) protein (469aa)
Putative glycolate oxidase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MX04_9FIRM
Putative glycolate oxidase {ECO:0000313|EMBL:CDF04407.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
glycolate oxidase
L2_039_000M1_scaffold_18_26
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24222..25436
DNA (1215bp) protein (405aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UDF5_9FIRM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
riboflavin biosynthesis protein ribBA
L2_039_000M1_scaffold_18_27
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25478..26146)
DNA (669bp) protein (223aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UB35_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ERT56536.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
cyclic nucleotide-binding domain protein
L2_039_000M1_scaffold_18_28
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26247..27005
DNA (759bp) protein (253aa)
4Fe-4S binding domain protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2UPA2_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERL19888.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
hypothetical protein
L2_039_000M1_scaffold_18_29
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27159..27608)
DNA (450bp) protein (150aa)
Transcriptional regulator, AsnC family n=2 Tax=Megasphaera RepID=D3LT55_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFD94625.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1 str. 28L.;"
transcriptional regulator
L2_039_000M1_scaffold_18_30
Anaeroglobus geminatus, Anaeroglobus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27757..28815)
DNA (1059bp) protein (353aa)
ApbE family protein n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YGX3_9FIRM
ApbE family protein {ECO:0000313|EMBL:EHM41671.1}; TaxID=861450 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaeroglobus.;" source="Anaeroglobus geminatus F0357.;"
ApbE family protein
Displaying items 1-30 of 94 in total

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