ggKbase home page

L2_039_000M1_scaffold_230

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_230_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2594)
DNA (2592bp) protein (864aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Parabacteroides RepID=K6AJU5_9PORP
L2_039_000M1_scaffold_230_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2773..4365)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K5ZAY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24002.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4415..7531)
DNA (3117bp) protein (1039aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6B7H2_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN24003.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8077..10560)
DNA (2484bp) protein (828aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Parabacteroides RepID=E1YXB0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24004.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
alanyl dipeptidyl peptidase
L2_039_000M1_scaffold_230_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10635..12956)
DNA (2322bp) protein (774aa)
Glycosyl hydrolase family 20, catalytic domain protein n=2 Tax=Parabacteroides RepID=E1YXA9_9PORP
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EFK61601.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
beta-N-acetylhexosaminidase
L2_039_000M1_scaffold_230_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13252..14103)
DNA (852bp) protein (284aa)
Metallo-beta-lactamase domain protein n=2 Tax=Parabacteroides RepID=E1YXA8_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFK61600.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
metal-dependent hydrolase
L2_039_000M1_scaffold_230_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14477..17539
DNA (3063bp) protein (1021aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=E1YXA7_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN24007.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17556..19262
DNA (1707bp) protein (569aa)
SusD family protein n=4 Tax=Bacteroidales RepID=C7XDE5_9PORP
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI07772.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_039_000M1_scaffold_230_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19614..21182
DNA (1569bp) protein (523aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7XDE4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24009.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21198..22973
DNA (1776bp) protein (592aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXA4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24010.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22970..24439
DNA (1470bp) protein (490aa)
WD40-like protein n=2 Tax=Parabacteroides RepID=E1YXA3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24011.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24503..25429
DNA (927bp) protein (309aa)
Mur ligase middle domain protein n=5 Tax=Bacteroidales RepID=C7XDE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24012.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
UDP-N-acetylmuramate-alanine ligase
L2_039_000M1_scaffold_230_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25426..25974
DNA (549bp) protein (183aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEW8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS59499.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_039_000M1_scaffold_230_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25989..26852
DNA (864bp) protein (288aa)
dTDP-4-dehydrorhamnose reductase n=2 Tax=Parabacteroides RepID=E1YXA0_9PORP
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EKN24014.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
dTDP-4-dehydrorhamnose reductase
L2_039_000M1_scaffold_230_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26882..28462
DNA (1581bp) protein (527aa)
Peptide chain release factor 3 n=2 Tax=Parabacteroides RepID=E1YX99_9PORP
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
peptide chain release factor 3
L2_039_000M1_scaffold_230_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28464..29471
DNA (1008bp) protein (336aa)
Thiamine biosynthesis lipoprotein ApbE n=3 Tax=Parabacteroides RepID=A6LEW5_PARD8
thiamine biosynthesis lipoprotein ApbE
ApbE family protein {ECO:0000313|EMBL:EFK61590.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_039_000M1_scaffold_230_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29603..30295)
DNA (693bp) protein (231aa)
HAD superfamily (Subfamily IA) hydrolase n=3 Tax=Bacteroidales RepID=D7IV53_9BACE
HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EFK61589.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
HAD superfamily hydrolase
L2_039_000M1_scaffold_230_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30295..31167)
DNA (873bp) protein (291aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEW3_PARD8
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:KDS59530.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_039_000M1_scaffold_230_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31187..31891)
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Parabacteroides RepID=E1YX95_9PORP
methyltransferase
L2_039_000M1_scaffold_230_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31901..32596)
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YX94_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61586.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_230_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32706..34121)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YX93_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61585.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
exonuclease V subunit alpha
L2_039_000M1_scaffold_230_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34215..34850
DNA (636bp) protein (212aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LEV9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS49589.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L2_039_000M1_scaffold_230_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34863..35687
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YX91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24023.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_230_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35678..36235
DNA (558bp) protein (186aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EEU49882.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEU49882.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
RNA methyltransferase, RsmD family n=7 Tax=Bacteroidales RepID=C7XDC9_9PORP
methyltransferase
L2_039_000M1_scaffold_230_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36207..37643)
DNA (1437bp) protein (479aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Cardiolipin synthase n=6 Tax=Bacteroidales RepID=D7IV61_9BACE
cardiolipin synthetase
Displaying 25 items

View Taxonomy