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L2_039_000M1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_300_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(32..829)
DNA (798bp) protein (266aa)
Integrase core domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D293_BACPM
Integrase core domain protein {ECO:0000313|EMBL:EDY94686.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Integrase catalytic region
L2_039_000M1_scaffold_300_2
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(874..1410)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D294_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94687.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
transposase IS3/IS911 family protein
L2_039_000M1_scaffold_300_3
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1512..2012)
DNA (501bp) protein (167aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAE0_9BACT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CCZ01045.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_300_4
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2012..3073)
DNA (1062bp) protein (354aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=3 Tax=Bacteroidetes RepID=F3Y1P1_9FLAO
S-adenosylmethionine tRNA ribosyltransferase
L2_039_000M1_scaffold_300_5
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3097..3804)
DNA (708bp) protein (236aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
tRNA pseudouridine synthase B n=3 Tax=Bacteroidetes RepID=F3Y1P2_9FLAO
tRNA pseudouridine synthase B
L2_039_000M1_scaffold_300_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3823..4611)
DNA (789bp) protein (263aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Undecaprenyl-diphosphatase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NBI1_9BACT
UDP-diphosphatase
L2_039_000M1_scaffold_300_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4638..4943)
DNA (306bp) protein (102aa)
Signal peptide protein YSIRK family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NG96_9BACT
Signal peptide protein YSIRK family {ECO:0000313|EMBL:CCZ01049.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_300_8
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4972..5805)
DNA (834bp) protein (278aa)
Cell division protein FtsX n=3 Tax=Bacteroidetes RepID=F3Y1P5_9FLAO
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
cell division protein FtsX
L2_039_000M1_scaffold_300_9
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5928..7253)
DNA (1326bp) protein (442aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUL8_9BACT
(dimethylallyl)adenosine tRNA methylthiotransferase MiaB
L2_039_000M1_scaffold_300_10
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7794..8336
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NVX6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01052.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_300_11
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8363..9451
DNA (1089bp) protein (363aa)
Transcriptional regulator AraC family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NBI4_9BACT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ01053.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_300_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9520..11031
DNA (1512bp) protein (504aa)
Succinate CoA transferase n=3 Tax=Bacteroidetes RepID=F3Y1Q0_9FLAO
Succinate CoA transferase {ECO:0000313|EMBL:CCZ01054.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
acetyl-CoA hydrolase
L2_039_000M1_scaffold_300_13
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11044..12441
DNA (1398bp) protein (466aa)
Bleomycin hydrolase (EC:3.4.22.40)
Peptidase C1-like family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAE7_9BACT
Peptidase C1-like family protein {ECO:0000313|EMBL:CCZ01055.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_300_14
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12475..13374
DNA (900bp) protein (300aa)
Diaminopimelate dehydrogenase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUM1_9BACT
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CCZ01056.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
meso-diaminopimelate D-dehydrogenase
L2_039_000M1_scaffold_300_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13543..14676
DNA (1134bp) protein (378aa)
OmpA family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NVY0_9BACT
OmpA family protein {ECO:0000313|EMBL:CCZ01057.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
OmpA/MotB domain protein
L2_039_000M1_scaffold_300_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14839..16020
DNA (1182bp) protein (394aa)
OmpA family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NBI9_9BACT
OmpA family protein {ECO:0000313|EMBL:CCZ01058.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
OmpA/MotB domain protein
L2_039_000M1_scaffold_300_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16309..17412)
DNA (1104bp) protein (368aa)
O-succinylbenzoic acid--CoA ligase family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NGA3_9BACT
O-succinylbenzoic acid--CoA ligase family protein {ECO:0000313|EMBL:CCZ01059.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
O-succinylbenzoic acid-CoA ligase
L2_039_000M1_scaffold_300_18
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17393..18430)
DNA (1038bp) protein (346aa)
Putative o-succinylbenzoate synthase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAF0_9BACT
Putative o-succinylbenzoate synthase {ECO:0000313|EMBL:CCZ01060.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative muconate cycloisomerase
L2_039_000M1_scaffold_300_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18427..19344)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01061.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_300_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19632..20096)
DNA (465bp) protein (155aa)
Conserved domain protein n=3 Tax=Bacteroidetes RepID=F3Y1Q9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01063.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_300_21
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20124..21119)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NGA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01064.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_300_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21277..21522)
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=F3QVD9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01065.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_300_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21653..21937)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3Y1R2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01066.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_300_24
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22141..22500
DNA (360bp) protein (120aa)
Transcriptional regulator, PadR family n=3 Tax=Bacteroidetes RepID=F3Y1R4_9FLAO
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EHH00880.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L2_039_000M1_scaffold_300_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22529..24241
DNA (1713bp) protein (571aa)
PspC domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NBJ6_9BACT
PspC domain protein {ECO:0000313|EMBL:CCZ01068.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
PspC domain-containing protein
L2_039_000M1_scaffold_300_26
unknown

Not on your lists

comp(24312..24482)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_039_000M1_scaffold_300_27
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24552..24704)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3Y1R6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ01069.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_300_28
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24713..27535)
DNA (2823bp) protein (941aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y1R7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00884.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L2_039_000M1_scaffold_300_29
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28431..29261)
DNA (831bp) protein (277aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=2 Tax=Bacteroidetes RepID=F3Y1S1_9FLAO
L2_039_000M1_scaffold_300_30
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29240..30919)
DNA (1680bp) protein (560aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase (EC:2.2.1.9 2.5.1.64)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Bacteroidetes RepID=F3Y1S2_9FLAO
Displaying items 1-30 of 33 in total

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