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L2_039_000M1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_342_1
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(237..704)
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=5 Tax=Acidaminococcus RepID=G4Q2T3_ACIIR
transcriptional repressor nrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L2_039_000M1_scaffold_342_2
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(728..1849)
DNA (1122bp) protein (374aa)
Cell division protein FtsZ n=5 Tax=Acidaminococcus RepID=G4Q2T4_ACIIR
ftsZ; cell division protein ftsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L2_039_000M1_scaffold_342_3
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2020..2346)
DNA (327bp) protein (109aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2T5_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22741.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_4
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2348..3040)
DNA (693bp) protein (231aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2T6_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22742.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_5
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3056..3775)
DNA (720bp) protein (240aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2T7_ACIIR
ftsQ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22743.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_6
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3922..4860)
DNA (939bp) protein (313aa)
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
D-alanine--D-alanine ligase n=5 Tax=Acidaminococcus RepID=G4Q2T8_ACIIR
L2_039_000M1_scaffold_342_7
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4857..6248)
DNA (1392bp) protein (464aa)
murC; UDP-N-acetylmuramate-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
UDP-N-acetylmuramate--L-alanine ligase n=4 Tax=Acidaminococcus RepID=G4Q2T9_ACIIR
L2_039_000M1_scaffold_342_8
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6253..7368)
DNA (1116bp) protein (372aa)
murG; UDP-N-acetylglucosamine-LPS N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=5 Tax=Acidaminococcus RepID=G4Q2U0_ACIIR
L2_039_000M1_scaffold_342_9
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7368..8747)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=2 Tax=Acidaminococcus RepID=R6N5H0_9FIRM
L2_039_000M1_scaffold_342_10
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8764..9729)
DNA (966bp) protein (322aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=4 Tax=Acidaminococcus RepID=C0WE51_9FIRM
L2_039_000M1_scaffold_342_11
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9726..11105)
DNA (1380bp) protein (460aa)
murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=3 Tax=Acidaminococcus RepID=G4Q2U3_ACIIR
L2_039_000M1_scaffold_342_12
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11102..12592)
DNA (1491bp) protein (497aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
murE; UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=3 Tax=Acidaminococcus RepID=C0WE50_9FIRM
L2_039_000M1_scaffold_342_13
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12698..13153)
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2U6_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22752.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_14
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13218..14147)
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
Ribosomal RNA small subunit methyltransferase H n=3 Tax=Acidaminococcus RepID=R6N5I0_9FIRM
S-adenosyl-methyltransferase mraW
L2_039_000M1_scaffold_342_15
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14169..14591)
DNA (423bp) protein (141aa)
Protein MraZ n=5 Tax=Acidaminococcus RepID=G4Q2U8_ACIIR
hypothetical protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_342_16
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15005..15223
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2U9_ACIIR
hypothetical protein
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EEH91378.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L2_039_000M1_scaffold_342_17
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16129..16368)
DNA (240bp) protein (80aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2V1_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22757.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_18
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16462..17982)
DNA (1521bp) protein (507aa)
garD; galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase n=3 Tax=Acidaminococcus RepID=U2W5R6_9FIRM
Galactarate dehydratase {ECO:0000313|EMBL:CDB93289.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_342_19
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18282..19253
DNA (972bp) protein (324aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
bioB; biotin synthetase (EC:2.8.1.6)
Biotin synthase n=5 Tax=Acidaminococcus RepID=G4Q2V3_ACIIR
L2_039_000M1_scaffold_342_20
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19318..22011)
DNA (2694bp) protein (898aa)
Hemagglutinin n=3 Tax=Acidaminococcus RepID=G4Q2V4_ACIIR
Hep/Hag repeat protein {ECO:0000313|EMBL:EEH90370.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
hemagglutinin
L2_039_000M1_scaffold_342_21
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22174..22356
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=G4Q2V6_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:ERL20055.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
hypothetical protein
L2_039_000M1_scaffold_342_22
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22615..23793
DNA (1179bp) protein (393aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2V7_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22763.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_23
unknown

Not on your lists

comp(24004..24228)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_039_000M1_scaffold_342_24
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24272..24706)
DNA (435bp) protein (145aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2V8_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22764.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_25
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24806..25291)
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=G4Q2V9_ACIIR
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEH90373.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
hypothetical protein
L2_039_000M1_scaffold_342_26
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25270..26079)
DNA (810bp) protein (270aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2W0_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB93331.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_342_27
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26076..26798)
DNA (723bp) protein (241aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q2W1_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB93332.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_039_000M1_scaffold_342_28
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26791..27480)
DNA (690bp) protein (230aa)
ABC amino acid transporter permease n=4 Tax=Acidaminococcus RepID=G4Q2W2_ACIIR
amino acid ABC transporter permease
ABC amino acid transporter permease {ECO:0000313|EMBL:AEQ22768.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_29
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27535..28368)
DNA (834bp) protein (278aa)
L-cystine-binding protein tcyJ n=4 Tax=Acidaminococcus RepID=G4Q2W3_ACIIR
L-cystine-binding protein tcyJ
L-cystine-binding protein tcyJ {ECO:0000313|EMBL:AEQ22769.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_039_000M1_scaffold_342_30
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28365..29708)
DNA (1344bp) protein (448aa)
Propionate catabolism protein n=3 Tax=Acidaminococcus RepID=G4Q2W4_ACIIR
propionate catabolism protein
Propionate catabolism protein {ECO:0000313|EMBL:AEQ22770.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Displaying items 1-30 of 31 in total

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