ggKbase home page

L2_039_000M1_scaffold_349

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_349_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

L2_039_000M1_scaffold_349_2
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(100..1035)
DNA (936bp) protein (312aa)
Gliding motility-associated protein GldL n=2 Tax=Bacteroidetes RepID=F3Y3F9_9FLAO
Gliding motility-associated protein GldL {ECO:0000313|EMBL:EHG98372.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
gliding motility-associated protein GldL
L2_039_000M1_scaffold_349_3
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1057..2493)
DNA (1437bp) protein (479aa)
Putative gliding motility-associated lipoprotein GldK n=3 Tax=Bacteroidetes RepID=F3Y3G0_9FLAO
Putative gliding motility-associated lipoprotein GldK {ECO:0000313|EMBL:EHG98373.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
gliding motility-associated lipoprotein GldK
L2_039_000M1_scaffold_349_4
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2496..3446)
DNA (951bp) protein (317aa)
Bacteroidetes-specific putative membrane protein n=3 Tax=Bacteroidetes RepID=F3Y3G1_9FLAO
Bacteroidetes-specific putative membrane protein {ECO:0000313|EMBL:CCZ02424.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Bacteroidetes-specific putative membrane protein
L2_039_000M1_scaffold_349_5
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3610..3831)
DNA (222bp) protein (74aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=F3QVR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHG98375.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L2_039_000M1_scaffold_349_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3901..4458)
DNA (558bp) protein (186aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NY99_9BACT
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:CCZ02426.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_349_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4472..5077)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02427.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_349_8
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5283..5606
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QVR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EGG52507.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
L2_039_000M1_scaffold_349_9
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5690..7696
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NF73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02428.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_349_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7757..8794
DNA (1038bp) protein (346aa)
Conserved domain protein n=2 Tax=Bacteroidetes RepID=F3Y3H0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG98382.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L2_039_000M1_scaffold_349_11
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8824..11331)
DNA (2508bp) protein (836aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NE40_9BACT
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CCZ02430.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
beta-galactosidase
L2_039_000M1_scaffold_349_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11361..12746)
DNA (1386bp) protein (462aa)
Phosphoglucosamine mutase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NYA3_9BACT
Phosphoglucosamine mutase {ECO:0000313|EMBL:CCZ02431.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
phosphoglucomutase/phosphomannomutase
L2_039_000M1_scaffold_349_13
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12864..15806
DNA (2943bp) protein (981aa)
Uncharacterized protein n=3 Tax=root RepID=F3Y3H3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG98385.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L2_039_000M1_scaffold_349_14
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15838..17205
DNA (1368bp) protein (456aa)
Na(+)/H(+) antiporter NhaA n=3 Tax=root RepID=G5SX05_9BACT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
sodium:proton antiporter
L2_039_000M1_scaffold_349_15
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17349..17867
DNA (519bp) protein (173aa)
Sigma-70 region 2 n=2 Tax=Bacteroidetes RepID=F3Y3H6_9FLAO
Sigma-70 region 2 {ECO:0000313|EMBL:EHG98388.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_039_000M1_scaffold_349_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17897..19228
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NYA9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02436.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_039_000M1_scaffold_349_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19308..21347)
DNA (2040bp) protein (680aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZZ2_9BACT
L2_039_000M1_scaffold_349_18
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22181..23242)
DNA (1062bp) protein (354aa)
Uncharacterized protein (Fragment) n=1 Tax=Paraprevotella clara YIT 11840 RepID=G5SX13_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHG98394.1}; Flags: Fragment;; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L2_039_000M1_scaffold_349_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23239..25104)
DNA (1866bp) protein (622aa)
F5/8 type C domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NE50_9BACT
F5/8 type C domain protein {ECO:0000313|EMBL:CCZ02440.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
calcium:sodium exchange protein
L2_039_000M1_scaffold_349_20
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25634..27667
DNA (2034bp) protein (678aa)
TonB-dependent receptor n=2 Tax=Bacteroidetes RepID=F3Y0T6_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:EHG99914.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ligand-gated channel protein
L2_039_000M1_scaffold_349_21
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27669..28835
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZZ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02442.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_039_000M1_scaffold_349_22
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28851..30089
DNA (1239bp) protein (413aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y0T8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99912.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
cell surface protein
L2_039_000M1_scaffold_349_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30103..30756
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NK25_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02444.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
uncharacterized protein
Displaying 23 items

View Taxonomy