ggKbase home page

L2_039_000M1_scaffold_353

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_353_1
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


151..420
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=12 Tax=Bacteroides RepID=RS15_BACV8
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L2_039_000M1_scaffold_353_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(523..1008)
DNA (486bp) protein (162aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
S-ribosylhomocysteine lyase n=2 Tax=Bacteroides RepID=E5UPD8_9BACE
S-ribosylhomocysteinase
L2_039_000M1_scaffold_353_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1020..1715)
DNA (696bp) protein (232aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=5 Tax=Bacteroides RepID=A6KYS5_BACV8
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
L2_039_000M1_scaffold_353_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1800..4292
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z0B9_9BACE
Bacterial membrane YfhO family protein {ECO:0000313|EMBL:KDS27971.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_039_000M1_scaffold_353_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4318..5064)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZTY2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78572.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycosyl transferase family protein
L2_039_000M1_scaffold_353_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5057..6319)
DNA (1263bp) protein (421aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EET14339.2}; EC=2.4.-.- {ECO:0000313|EMBL:EET14339.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycosyltransferase family 4 n=6 Tax=root RepID=A6KYS2_BACV8
glycosyl transferase family protein
L2_039_000M1_scaffold_353_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6316..7287)
DNA (972bp) protein (324aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6KYS1_BACV8
glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ABR38585.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_039_000M1_scaffold_353_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7260..7529)
DNA (270bp) protein (90aa)
Hemolysin hemolytic protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UPE4_9BACE
hemolysin activation protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB22622.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_039_000M1_scaffold_353_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7513..8151)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z0C3_9BACE
hemolysin hemolytic protein
Uncharacterized protein {ECO:0000313|EMBL:EET14341.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_039_000M1_scaffold_353_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8165..8962)
DNA (798bp) protein (266aa)
LICD family protein n=4 Tax=Bacteroides RepID=C6Z0C4_9BACE
cholinephosphotransferase
Uncharacterized protein {ECO:0000313|EMBL:EIY78576.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_039_000M1_scaffold_353_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8966..10066)
DNA (1101bp) protein (367aa)
NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain protein n=2 Tax=Bacteroides RepID=C6Z0C5_9BACE
NAD-dependent glycerol-3-phosphate dehydrogenase family protein {ECO:0000313|EMBL:KDS27965.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
octopine dehydrogenase
L2_039_000M1_scaffold_353_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10063..11868)
DNA (1806bp) protein (602aa)
Aminotransferase, class I/II n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAS3_BACVU
MobA-like NTP transferase domain protein {ECO:0000313|EMBL:KDS27964.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hemolysin erythrocyte lysis protein 2
L2_039_000M1_scaffold_353_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11959..12789
DNA (831bp) protein (277aa)
Glycosyltransferase family 23 n=5 Tax=root RepID=A6KYR6_BACV8
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:EET14345.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_039_000M1_scaffold_353_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12812..13837)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0C8_9BACE
Acyltransferase family protein {ECO:0000313|EMBL:KDS27962.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
transporter
L2_039_000M1_scaffold_353_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13837..15273)
DNA (1437bp) protein (479aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAS6_BACVU
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KDS27961.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
lipopolysaccharide biosynthesis protein
L2_039_000M1_scaffold_353_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15355..17397)
DNA (2043bp) protein (681aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Bacteroides RepID=C6Z0D0_9BACE
L2_039_000M1_scaffold_353_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17684..17851
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY78583.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_039_000M1_scaffold_353_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17853..19391)
DNA (1539bp) protein (513aa)
Magnesium chelatase, subunit ChlI n=5 Tax=Bacteroides RepID=A6KYR2_BACV8
magnesium chelatase subunit ChlI
Mg chelatase-like protein {ECO:0000313|EMBL:EET14350.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_039_000M1_scaffold_353_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19396..20463)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0D3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET14351.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_039_000M1_scaffold_353_20
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20617..22293)
DNA (1677bp) protein (559aa)
Plasminogen binding protein n=2 Tax=Bacteroides PF5_9BACE">RepID=E5UPF5_9BACE
Plasminogen binding protein {ECO:0000313|EMBL:EFV68881.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
plasminogen binding protein
L2_039_000M1_scaffold_353_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22435..23376)
DNA (942bp) protein (314aa)
Tyrosine recombinase XerC n=7 Tax=Bacteroides RepID=A6KYQ9_BACV8
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_039_000M1_scaffold_353_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23443..23865
DNA (423bp) protein (141aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
3-dehydroquinate dehydratase n=3 Tax=Bacteroides RepID=A6KYQ8_BACV8
L2_039_000M1_scaffold_353_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23898..25361
DNA (1464bp) protein (488aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Pyruvate kinase n=14 Tax=Bacteroides RepID=A6KYQ7_BACV8
L2_039_000M1_scaffold_353_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25377..26015
DNA (639bp) protein (213aa)
O-methyltransferase n=6 Tax=Bacteroides RepID=A6KYQ6_BACV8
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EFV68885.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_039_000M1_scaffold_353_25
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26089..26424
DNA (336bp) protein (112aa)
Ribosome-binding factor A n=15 Tax=root RepID=A6KYQ5_BACV8
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000313|EMBL:EEO59985.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L2_039_000M1_scaffold_353_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26434..27672
DNA (1239bp) protein (413aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KYQ4_BACV8
hypothetical protein
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EET14358.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_039_000M1_scaffold_353_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28059..28931)
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxine kinase n=5 Tax=Bacteroides RepID=A6KYQ3_BACV8
L2_039_000M1_scaffold_353_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28988..29860)
DNA (873bp) protein (291aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glutamate racemase n=3 Tax=Bacteroides RepID=C3RA01_9BACE
glutamate racemase
L2_039_000M1_scaffold_353_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29936..30439)
DNA (504bp) protein (168aa)
Outer membrane protein n=7 Tax=Bacteroides RepID=C6Z0E3_9BACE
outer membrane protein OmpH
Outer membrane family protein {ECO:0000313|EMBL:KDS27947.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_039_000M1_scaffold_353_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30497..31012)
DNA (516bp) protein (172aa)
Cationic outer membrane protein n=2 Tax=Bacteroides vulgatus RepID=A6KYQ0_BACV8
cationic outer membrane protein
Cationic outer membrane protein {ECO:0000313|EMBL:ABR38564.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying items 1-30 of 40 in total

View Taxonomy