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L2_039_000M1_scaffold_380

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_380_1
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..409)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BCH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88772.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
transposase IS4 family protein
L2_039_000M1_scaffold_380_2
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

616..813
DNA (198bp) protein (66aa)
Transcriptional regulator, GntR family n=1 Tax=Oribacterium sinus F0268 RepID=C2L0Q2_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEJ50394.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
L2_039_000M1_scaffold_380_3
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1291..2601
DNA (1311bp) protein (437aa)
UPF0597 protein HMPREF9624_01310 n=1 Tax=Oribacterium sp. ACB7 RepID=G9WWM6_9FIRM
UPF0597 protein UYO_1461 {ECO:0000256|HAMAP-Rule:MF_01845}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L2_039_000M1_scaffold_380_4
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2620..4029
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HVA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16203.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
C4-dicarboxylate ABC transporter permease
L2_039_000M1_scaffold_380_5
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4135..5307
DNA (1173bp) protein (391aa)
Amidohydrolase n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2TCH0_9FIRM
Amidohydrolase {ECO:0000313|EMBL:ERL04190.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
amidohydrolase
L2_039_000M1_scaffold_380_6
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5663..7048
DNA (1386bp) protein (462aa)
UPF0597 protein HMPREF9624_01310 n=1 Tax=Oribacterium sp. ACB7 RepID=G9WWM6_9FIRM
UPF0597 protein UYO_1461 {ECO:0000256|HAMAP-Rule:MF_01845}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L2_039_000M1_scaffold_380_7
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7045..8028
DNA (984bp) protein (328aa)
Site-specific recombinase XerD n=1 Tax=Coprococcus catus GD/7 RepID=D4J4V9_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK79380.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_039_000M1_scaffold_380_8
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8018..9040
DNA (1023bp) protein (341aa)
Site-specific recombinase XerD n=1 Tax=Coprococcus catus GD/7 RepID=D4J4V8_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK79379.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_039_000M1_scaffold_380_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9749..10972
DNA (1224bp) protein (408aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
arcA; Arginine deiminase (EC:3.5.3.6)
Arginine deiminase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDD5_9CLOT
L2_039_000M1_scaffold_380_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10994..11986
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGI0_9FIRM
L2_039_000M1_scaffold_380_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11998..13008
DNA (1011bp) protein (337aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDD3_9CLOT
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_039_000M1_scaffold_380_12
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13005..14258)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDD1_9CLOT
HTH-type transcriptional regulator YesS {ECO:0000313|EMBL:KJJ73176.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
AraC family transcriptional regulator
L2_039_000M1_scaffold_380_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14314..15552)
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFK5_9CLOT
HTH-type transcriptional regulator YesS {ECO:0000313|EMBL:KJJ65798.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
AraC family transcriptional regulator
L2_039_000M1_scaffold_380_14
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16115..16891
DNA (777bp) protein (259aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KJJ65797.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJJ65797.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFK3_9CLOT
short-chain dehydrogenase/reductase SDR
L2_039_000M1_scaffold_380_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16942..18330
DNA (1389bp) protein (463aa)
Atrazine chlorohydrolase {ECO:0000313|EMBL:KJJ65796.1}; EC=3.8.1.8 {ECO:0000313|EMBL:KJJ65796.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFK2_9CLOT
amidohydrolase
L2_039_000M1_scaffold_380_16
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18348..19529
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFK1_9CLOT
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:KJJ65795.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Extracellular ligand-binding receptor precursor
L2_039_000M1_scaffold_380_17
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19544..20419
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFK0_9CLOT
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJJ65794.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
livH; leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily
L2_039_000M1_scaffold_380_18
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20433..21332
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ9_9CLOT
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJJ65793.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Inner-membrane translocator precursor
L2_039_000M1_scaffold_380_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21296..22117
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ8_9CLOT
Putative ABC transporter ATP-binding protein YbhF {ECO:0000313|EMBL:KJJ65792.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
L2_039_000M1_scaffold_380_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22119..22817
DNA (699bp) protein (233aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ7_9CLOT
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJJ65791.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L2_039_000M1_scaffold_380_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22838..23599
DNA (762bp) protein (254aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KJJ65790.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJJ65790.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ6_9CLOT
L2_039_000M1_scaffold_380_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23614..24465
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99860.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
polysaccharide deacetylase
L2_039_000M1_scaffold_380_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24458..25276
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99859.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
polysaccharide deacetylase
L2_039_000M1_scaffold_380_24
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25294..26604
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ65787.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_039_000M1_scaffold_380_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26804..27205
DNA (402bp) protein (134aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDD3_9CLOT
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L2_039_000M1_scaffold_380_26
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27270..28199
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GJH1_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35806.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_039_000M1_scaffold_380_27
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28513..29265
DNA (753bp) protein (251aa)
AbgT transporter n=9 Tax=Clostridium RepID=N9W9A8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23713.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_039_000M1_scaffold_380_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29258..30187
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TEA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61594.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
transposase IS4 family protein
Displaying 28 items

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