ggKbase home page

L2_039_000M1_scaffold_401

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_401_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

182..403
DNA (222bp) protein (74aa)
Uncharacterized protein n=20 Tax=Bacteroidales RepID=A6LH66_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD14851.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_039_000M1_scaffold_401_2
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

604..1956
DNA (1353bp) protein (451aa)
Integrase family protein n=2 Tax=Bacteroidales RepID=F9Z9S7_ODOSD
integrase
Integrase family protein {ECO:0000313|EMBL:ADY32077.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L2_039_000M1_scaffold_401_3
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1980..2657
DNA (678bp) protein (226aa)
Putative transmembrane protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5X4X2_9BACT
Putative transmembrane protein {ECO:0000313|EMBL:CCZ99602.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
transmembrane protein
L2_039_000M1_scaffold_401_4
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2900..3232
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S3C5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL86904.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
hypothetical protein
L2_039_000M1_scaffold_401_5
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3225..4724
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0F4J0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF74670.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
hypothetical protein
L2_039_000M1_scaffold_401_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4717..5745
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IXB9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06817.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_039_000M1_scaffold_401_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5896..7437
DNA (1542bp) protein (514aa)
Putative plasmid recombination enzyme n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MV48_9BACT
Putative plasmid recombination enzyme {ECO:0000313|EMBL:EDS03930.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
recombination enzyme
L2_039_000M1_scaffold_401_8
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7559..8470
DNA (912bp) protein (304aa)
DNA adenine methylase n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R3J0_BACSH
modification methylase
Modification methylase {ECO:0000313|EMBL:AHF12536.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_039_000M1_scaffold_401_9
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8472..9329
DNA (858bp) protein (286aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:ADY36621.1}; EC=3.1.21.4 {ECO:0000313|EMBL:ADY36621.1};; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
Type II site-specific deoxyribonuclease n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R3I9_BACSH
L2_039_000M1_scaffold_401_10
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9342..9878
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5RVH3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ44783.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
hypothetical protein
L2_039_000M1_scaffold_401_11
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9878..10759
DNA (882bp) protein (294aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RDN5_9BACE
DNA methylase N-4/N-6 domain-containing protein
L2_039_000M1_scaffold_401_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10798..12480
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K5N5_9FIRM
AIPR family protein {ECO:0000313|EMBL:KDS63830.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
AIPR protein.
L2_039_000M1_scaffold_401_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12857..13711
DNA (855bp) protein (285aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A842_9PORP
Bacteroidetes-specific membrane family protein {ECO:0000313|EMBL:KDS71631.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L2_039_000M1_scaffold_401_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13715..15142
DNA (1428bp) protein (476aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LH64_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45028.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_039_000M1_scaffold_401_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15194..16285
DNA (1092bp) protein (364aa)
Gliding motility-associated protein GldL n=2 Tax=Parabacteroides RepID=E1YNG5_9PORP
Gliding motility-associated protein GldL {ECO:0000313|EMBL:EFK64733.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_401_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16292..17860
DNA (1569bp) protein (523aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LH62_PARD8
hypothetical protein
Gliding motility-associated protein GldM {ECO:0000313|EMBL:EEY83604.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L2_039_000M1_scaffold_401_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17871..18965
DNA (1095bp) protein (365aa)
Gliding motility-associated protein GldN n=3 Tax=Parabacteroides RepID=E1YNG3_9PORP
Gliding motility associated protein GldN {ECO:0000313|EMBL:EKN31089.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_401_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19015..19551
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=2 Tax=Parabacteroides RepID=E1YNG2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31090.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
N-acetyltransferase GCN5
L2_039_000M1_scaffold_401_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19615..20802)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X413_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64729.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_401_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20808..21767)
DNA (960bp) protein (320aa)
Hydrolase, carbon-nitrogen family n=3 Tax=Bacteroidales RepID=D7ILQ0_9BACE
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EFI10277.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hydrolase
L2_039_000M1_scaffold_401_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21863..22372
DNA (510bp) protein (170aa)
Acetyltransferase, GNAT family n=2 Tax=Parabacteroides RepID=E1YNF9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31093.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
acetyltransferase
L2_039_000M1_scaffold_401_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22369..22995
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ASS2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31094.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
chloramphenicol acetyltransferase
L2_039_000M1_scaffold_401_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23191..23451
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=D0TE86_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10274.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_039_000M1_scaffold_401_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23520..24737)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B4S9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31096.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
acyltransferase
L2_039_000M1_scaffold_401_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25009..28062)
DNA (3054bp) protein (1018aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YNF5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31097.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
Displaying 25 items

View Taxonomy