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L2_039_000M1_scaffold_420

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_420_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..849
DNA (849bp) protein (283aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Parabacteroides RepID=E1Z056_9PORP
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EEY82559.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
mechano-sensitive ion channel
L2_039_000M1_scaffold_420_2
unknown

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874..1002
DNA (129bp) protein (43aa)

This feature has no annotations

L2_039_000M1_scaffold_420_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

950..1558
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z057_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23784.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_420_4
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1664..2881)
DNA (1218bp) protein (406aa)
Peptidase C1-like family n=2 Tax=Parabacteroides RepID=E1Z058_9PORP
Peptidase C1-like family {ECO:0000313|EMBL:EFK60653.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
aminopeptidase
L2_039_000M1_scaffold_420_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3036..3839
DNA (804bp) protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Pyrroline-5-carboxylate reductase n=3 Tax=Parabacteroides RepID=K5ZAG1_9PORP
pyrroline-5-carboxylate reductase
L2_039_000M1_scaffold_420_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3902..5089)
DNA (1188bp) protein (396aa)
Proline dehydrogenase {ECO:0000313|EMBL:EFK60655.1}; EC=1.5.99.8 {ECO:0000313|EMBL:EFK60655.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Proline dehydrogenase n=2 Tax=Parabacteroides RepID=E1Z060_9PORP
proline dehydrogenase
L2_039_000M1_scaffold_420_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5180..6811)
DNA (1632bp) protein (544aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EEU50315.1}; EC=1.5.1.12 {ECO:0000313|EMBL:EEU50315.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Delta-1-pyrroline-5-carboxylate dehydrogenase n=7 Tax=Parabacteroides RepID=A6LE69_PARD8
delta-1-pyrroline-5-carboxylate dehydrogenase
L2_039_000M1_scaffold_420_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7028..7216
DNA (189bp) protein (63aa)
Ferredoxin n=8 Tax=Bacteroidales RepID=C7XBW4_9PORP
Ferredoxin {ECO:0000313|EMBL:EEU50314.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L2_039_000M1_scaffold_420_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7371..8024
DNA (654bp) protein (218aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LE70_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50313.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_039_000M1_scaffold_420_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8208..8762
DNA (555bp) protein (185aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6LE71_PARD8
transcriptional regulator
DNA-binding protein {ECO:0000313|EMBL:EFI08601.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_039_000M1_scaffold_420_11
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8775..10430
DNA (1656bp) protein (552aa)
AMP-binding enzyme n=3 Tax=Bacteroidales RepID=D0THG4_9BACE
AMP-binding enzyme {ECO:0000313|EMBL:EEY82568.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
acetyl-coenzyme A synthetase
L2_039_000M1_scaffold_420_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10446..11519
DNA (1074bp) protein (358aa)
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Glutamate 5-kinase n=9 Tax=Bacteroidales RepID=A6LE73_PARD8
L2_039_000M1_scaffold_420_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11525..12772
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Gamma-glutamyl phosphate reductase n=4 Tax=Parabacteroides RepID=C7XBV9_9PORP
proA; gamma-glutamyl phosphate reductase
L2_039_000M1_scaffold_420_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12823..14298
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=E1Z068_9PORP
two-component system sensor histidine kinase
L2_039_000M1_scaffold_420_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14378..15340
DNA (963bp) protein (321aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:EFK60664.1}; EC=2.1.3.9 {ECO:0000313|EMBL:EFK60664.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
N-acetylornithine carbamoyltransferase n=2 Tax=Parabacteroides RepID=E1Z069_9PORP
ornithine carbamoyltransferase
L2_039_000M1_scaffold_420_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15540..15854)
DNA (315bp) protein (105aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LE77_PARD8
transcriptional accessory protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60665.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_039_000M1_scaffold_420_17
unknown

Not on your lists

15874..16038
DNA (165bp) protein (55aa)

This feature has no annotations

L2_039_000M1_scaffold_420_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16217..17101)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=4 Tax=Bacteroidales RepID=C7XBV5_9PORP
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU50305.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_039_000M1_scaffold_420_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17117..17980)
DNA (864bp) protein (288aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Parabacteroides RepID=E1Z072_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23769.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_420_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18141..22436)
DNA (4296bp) protein (1432aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=3 Tax=Bacteroidales RepID=D0THH2_9BACE
L2_039_000M1_scaffold_420_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22513..26325)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=11 Tax=Bacteroidales RepID=RPOB_PARD8
L2_039_000M1_scaffold_420_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26433..26810)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=8 Tax=Bacteroidales RepID=C7XBV1_9PORP
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
rplL; 50S ribosomal protein L7/L12
L2_039_000M1_scaffold_420_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26861..27391)
DNA (531bp) protein (177aa)
Ribosomal protein L10 n=4 Tax=Bacteroidales RepID=D0THH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23765.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
rplJ; 50S ribosomal protein L10
L2_039_000M1_scaffold_420_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27406..27600)
DNA (195bp) protein (65aa)
50S ribosomal protein L1 n=1 Tax=Parabacteroides sp. D25 RepID=K5ZV21_9PORP
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Displaying 24 items

View Taxonomy