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L2_039_000M1_scaffold_452

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_452_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(156..1268)
DNA (1113bp) protein (371aa)
Creatininase {ECO:0000313|EMBL:EEG51608.1}; EC=3.5.2.10 {ECO:0000313|EMBL:EEG51608.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Creatininase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAP9_9CLOT
creatinine amidohydrolase
L2_039_000M1_scaffold_452_2
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1326..2321)
DNA (996bp) protein (332aa)
Ribose transport system permease protein RbsC n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W5_CLOBO
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM97686.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
ribose ABC transporter permease
L2_039_000M1_scaffold_452_3
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2293..3816)
DNA (1524bp) protein (508aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
monosaccharide-transporting ATPase (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W6_CLOBO
L2_039_000M1_scaffold_452_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3834..4859)
DNA (1026bp) protein (342aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Desulfurispora thermophila RepID=UPI000366DF5F
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH95322.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
Periplasmic binding protein/LacI transcriptional regulator
L2_039_000M1_scaffold_452_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5100..6224
DNA (1125bp) protein (375aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPY0_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDO62485.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transcriptional regulator
L2_039_000M1_scaffold_452_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6295..7644)
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3W4_9CLOT
L2_039_000M1_scaffold_452_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7812..8588)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43603.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8822..9514)
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITE1_9CLOT
L2_039_000M1_scaffold_452_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9736..9981
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43605.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10064..10678)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3K4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43606.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11348..12406
DNA (1059bp) protein (353aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN78_9CLOT
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CCY43608.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC-type sugar transport system, periplasmic component
L2_039_000M1_scaffold_452_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12499..14043
DNA (1545bp) protein (515aa)
rbsA; ribose ABC transporter ATP-binding protein (EC:3.6.3.17)
ABC-type sugar transport system ATPase component n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING0_9CLOT
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:CCY43610.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_452_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14024..14959
DNA (936bp) protein (312aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3K8_9CLOT
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components {ECO:0000313|EMBL:CCY43611.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
L2_039_000M1_scaffold_452_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14976..16460
DNA (1485bp) protein (495aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Sugar (Pentulose and hexulose) kinases n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN81_9CLOT
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CCY43613.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_452_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16526..17335)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43614.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17347..17895)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43615.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18180..18755
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43616.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
SNARE associated Golgi protein
L2_039_000M1_scaffold_452_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18907..19545
DNA (639bp) protein (213aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3X6_9CLOT
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CCY43617.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted membrane-bound metal-dependent hydrolase (DUF457).
L2_039_000M1_scaffold_452_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19701..20561
DNA (861bp) protein (287aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN86_9CLOT
L2_039_000M1_scaffold_452_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20682..21767)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43619.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21799..23442)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43620.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_452_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23451..24737)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3L7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43621.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative type I restriction/modification enzyme, S subunit
L2_039_000M1_scaffold_452_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24740..26128)
DNA (1389bp) protein (463aa)
Type I restriction-modification system (Specificity subunit) n=1 Tax=Clostridium sp. CAG:7 RepID=R5INS6_9CLOT
Type I restriction-modification system (Specificity subunit) {ECO:0000313|EMBL:CCY43828.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
N-6 DNA methylase
L2_039_000M1_scaffold_452_24
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26422..27687)
DNA (1266bp) protein (422aa)
Transposase, IS4 family n=5 Tax=root RepID=D4C6Y5_9CLOT
Transposase, IS4 family {ECO:0000313|EMBL:EFE14323.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
transposase dde domain
L2_039_000M1_scaffold_452_25
unknown

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27752..27823
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 25 items

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