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L2_039_000M1_scaffold_510

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_510_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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317..1738
DNA (1422bp) protein (474aa)
Transcriptional regulator, GntR family n=2 Tax=Parabacteroides RepID=E1YWD0_9PORP
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFK62285.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
transcriptional regulator
L2_039_000M1_scaffold_510_2
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1726..2922)
DNA (1197bp) protein (399aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEY84714.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEY84714.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Aminotransferase, class I and II family protein n=4 Tax=Bacteroidales RepID=D7ITY3_9BACE
aminotransferase
L2_039_000M1_scaffold_510_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3274..3501
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X8J6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN33571.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_039_000M1_scaffold_510_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3547..4755)
DNA (1209bp) protein (403aa)
Hexokinase type III n=6 Tax=Bacteroidales RepID=A6LBE7_PARD8
hexokinase type III
Hexokinase {ECO:0000313|EMBL:EEY84716.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L2_039_000M1_scaffold_510_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4971..5144
DNA (174bp) protein (58aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7X8J4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52402.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_039_000M1_scaffold_510_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5347..5865)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YWD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62289.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
4-carboxymuconolactone decarboxylase
L2_039_000M1_scaffold_510_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6066..6683
DNA (618bp) protein (206aa)
Transcriptional regulator n=3 Tax=Parabacteroides RepID=A6LBE5_PARD8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR43009.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_039_000M1_scaffold_510_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6690..6965
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=C7X8J1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62291.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_510_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6927..8066)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A2S0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN33577.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_510_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8127..8726
DNA (600bp) protein (200aa)
Serine type site-specific recombinase n=9 Tax=Bacteroidales RepID=A6LBE2_PARD8
serine type site-specific recombinase
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFK62293.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_039_000M1_scaffold_510_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8736..9812)
DNA (1077bp) protein (359aa)
Magnesium and cobalt transport protein CorA n=2 Tax=Parabacteroides RepID=E1YWD9_9PORP
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Mg2+/Co2+ transport protein
L2_039_000M1_scaffold_510_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9828..12296)
DNA (2469bp) protein (823aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Endonuclease MutS2 n=4 Tax=Bacteroidales RepID=A6LBE0_PARD8
DNA mismatch repair protein MutS
L2_039_000M1_scaffold_510_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12312..13739)
DNA (1428bp) protein (476aa)
PDZ/DHR/GLGF domain protein n=3 Tax=Parabacteroides RepID=E1YWE1_9PORP
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EFK62296.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
PDZ domain-containing protein
L2_039_000M1_scaffold_510_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13959..14543
DNA (585bp) protein (195aa)
Protein GrpE n=5 Tax=Bacteroidales RepID=D7ITZ4_9BACE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
molecular chaperon GrpE protein
L2_039_000M1_scaffold_510_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14574..15728
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ n=9 Tax=Bacteroidales RepID=A6LBD7_PARD8
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_039_000M1_scaffold_510_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15869..16441
DNA (573bp) protein (191aa)
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EFK62299.1}; EC=2.5.1.17 {ECO:0000313|EMBL:EFK62299.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ATP:cob(I)alamin adenosyltransferase n=2 Tax=Parabacteroides RepID=E1YWE4_9PORP
ATP:cob(I)alamin adenosyltransferase
L2_039_000M1_scaffold_510_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16438..17283)
DNA (846bp) protein (282aa)
PHP domain-containing protein n=4 Tax=Bacteroidales RepID=D7ITZ7_9BACE
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:EKN33585.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
histidinol-phosphatase
L2_039_000M1_scaffold_510_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17362..18552)
DNA (1191bp) protein (397aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
2-amino-3-ketobutyrate CoA ligase n=8 Tax=Bacteroidales RepID=A6LBD4_PARD8
L2_039_000M1_scaffold_510_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18732..19685
DNA (954bp) protein (318aa)
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFK62302.1}; EC=5.1.3.- {ECO:0000313|EMBL:EFK62302.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Epimerase/reductase n=3 Tax=Bacteroidales RepID=D7ITZ9_9BACE
epimerase/reductase
L2_039_000M1_scaffold_510_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19773..20504)
DNA (732bp) protein (244aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
tRNA (guanine-N(1)-)-methyltransferase n=9 Tax=Bacteroidales RepID=A6LBD2_PARD8
L2_039_000M1_scaffold_510_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


20702..23164
DNA (2463bp) protein (821aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=4 Tax=Bacteroidales RepID=D7IU01_9BACE
L2_039_000M1_scaffold_510_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23204..23935
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein BDI_1233 n=9 Tax=Bacteroidales RepID=Y1233_PARD8
hypothetical protein
Probable transcriptional regulatory protein BN529_01014 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L2_039_000M1_scaffold_510_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24081..24320
DNA (240bp) protein (80aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LBC9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74725.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying 23 items

View Taxonomy