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L2_039_000M1_scaffold_538

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_538_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..349
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YXN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS46346.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L2_039_000M1_scaffold_538_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

475..1242
DNA (768bp) protein (256aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
surE; stationary phase survival protein SurE (EC:3.1.3.2)
5'-nucleotidase SurE n=2 Tax=Parabacteroides RepID=E1YXN6_9PORP
L2_039_000M1_scaffold_538_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1260..2393
DNA (1134bp) protein (378aa)
Lipid-A-disaccharide synthase n=2 Tax=Parabacteroides RepID=E1YXN7_9PORP
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EKN24118.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
glycosyltransferase family lipid-alpha-disaccharide synthase
L2_039_000M1_scaffold_538_4
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2488..3249
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXN8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61730.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_538_5
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3382..3912
DNA (531bp) protein (177aa)
Sigma-70 region 2 n=5 Tax=Bacteroidales RepID=D0TFS8_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EEY82952.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
RNA polymerase ECF-type sigma factor
L2_039_000M1_scaffold_538_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3915..4451
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24115.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_538_7
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4477..5562
DNA (1086bp) protein (362aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LF95_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61733.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_039_000M1_scaffold_538_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5609..5992)
DNA (384bp) protein (128aa)
Gram-positive signal peptide protein, YSIRK family n=6 Tax=Bacteroidales RepID=E1YXP2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS46423.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L2_039_000M1_scaffold_538_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5989..6552)
DNA (564bp) protein (188aa)
Sigma-70 region 2 n=4 Tax=Parabacteroides RepID=E1YXP3_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EFK61735.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
RNA polymerase ECF-type sigma factor
L2_039_000M1_scaffold_538_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6563..6970)
DNA (408bp) protein (136aa)
Uncharacterized protein n=6 Tax=Parabacteroides RepID=C7XDR6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61736.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_538_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7148..8806)
DNA (1659bp) protein (553aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Parabacteroides RepID=E1YXP5_9PORP
oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EKN24110.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_039_000M1_scaffold_538_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8812..9318)
DNA (507bp) protein (169aa)
DoxX family protein n=8 Tax=Bacteroidales RepID=C7XDR8_9PORP
DoxX family protein {ECO:0000313|EMBL:EFK61738.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_538_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9436..10290)
DNA (855bp) protein (285aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=C7XDR9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61739.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_538_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10313..11803)
DNA (1491bp) protein (497aa)
Tat pathway signal sequence domain protein n=8 Tax=Bacteroidales RepID=C7XDS0_9PORP
dehydrogenase
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU50023.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_039_000M1_scaffold_538_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12095..12322
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XDS1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61741.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_538_16
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12336..13892
DNA (1557bp) protein (519aa)
Cytochrome D ubiquinol oxidase, subunit I n=8 Tax=Bacteroidales RepID=C7XDS2_9PORP
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:CDB48091.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
cytochrome D ubiquinol oxidase subunit I
L2_039_000M1_scaffold_538_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13933..15084
DNA (1152bp) protein (384aa)
Cytochrome D ubiquinol oxidase subunit II n=9 Tax=Bacteroidales RepID=A6LFA4_PARD8
cytochrome D ubiquinol oxidase subunit II
Putative cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EEU50026.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_039_000M1_scaffold_538_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15208..16803)
DNA (1596bp) protein (532aa)
Peptidase, M28 family n=2 Tax=Parabacteroides RepID=E1YXQ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24103.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_039_000M1_scaffold_538_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17128..18042
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=2 Tax=Parabacteroides RepID=E1YXQ3_9PORP
L2_039_000M1_scaffold_538_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18129..18449
DNA (321bp) protein (107aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7XDS6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50029.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L2_039_000M1_scaffold_538_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18666..21941)
DNA (3276bp) protein (1092aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXQ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61747.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_039_000M1_scaffold_538_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22321..22509)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6A7X1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24099.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_039_000M1_scaffold_538_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23316..23432
DNA (117bp) protein (39aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YXQ6_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN24098.1}; Flags: Fragment;; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Displaying 23 items

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