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L2_039_000M1_scaffold_557

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_557_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Phosphate regulon sensor protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMB5_9CLOT
L2_039_000M1_scaffold_557_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(288..1001)
DNA (714bp) protein (238aa)
DNA-binding response regulator MtrA n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH96_9CLOT
DNA-binding response regulator MtrA {ECO:0000313|EMBL:CCY41445.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
winged helix family two component transcriptional regulator
L2_039_000M1_scaffold_557_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1058..2599)
DNA (1542bp) protein (514aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXK0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCY41446.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
heavy metal transport/detoxification protein
L2_039_000M1_scaffold_557_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2816..3583
DNA (768bp) protein (256aa)
Uncharacterized metal-binding protein conserved in archaea n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXE7_9CLOT
Uncharacterized metal-binding protein conserved in archaea {ECO:0000313|EMBL:CCY41447.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized metal-binding protein conserved in archaea
L2_039_000M1_scaffold_557_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3653..4519
DNA (867bp) protein (289aa)
ABC-type transporter periplasmic subunit family 3 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH32_9CLOT
ABC-type transporter periplasmic subunit family 3 {ECO:0000313|EMBL:CCY41448.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tcyK; L-cystine-binding protein TcyK
L2_039_000M1_scaffold_557_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4587..5303
DNA (717bp) protein (239aa)
Sulfur-containing amino acid ABC transporter permease TcyL n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMC2_9CLOT
Sulfur-containing amino acid ABC transporter permease TcyL {ECO:0000313|EMBL:CCY41449.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tcyL; L-cystine transport system permease protein TcyL
L2_039_000M1_scaffold_557_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5287..6000
DNA (714bp) protein (238aa)
ABC-type transporter integral membrane subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHA2_9CLOT
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CCY41450.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tcyM; L-cystine transport system permease protein TcyM
L2_039_000M1_scaffold_557_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5997..6749
DNA (753bp) protein (251aa)
tcyN2; L-cystine import ATP-binding protein TcyN (EC:3.6.3.-)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXK5_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CCY41451.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_557_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6914..8065
DNA (1152bp) protein (384aa)
patB; cystathionine beta-lyase PatB (EC:4.4.1.8)
Aminotransferase class I and II n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXF3_9CLOT
Aminotransferase class I and II {ECO:0000313|EMBL:CCY41452.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_557_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8105..9292
DNA (1188bp) protein (396aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMC8_9CLOT
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCY41454.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mandelate racemase/muconate lactonizing protein
L2_039_000M1_scaffold_557_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9394..10707
DNA (1314bp) protein (438aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH43_9CLOT
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:CCY41458.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
C4-dicarboxylate anaerobic carrier
L2_039_000M1_scaffold_557_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10792..11106
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41460.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_557_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11109..12023
DNA (915bp) protein (305aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXL7_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY41461.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Signal transduction histidine kinase
L2_039_000M1_scaffold_557_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12029..12541)
DNA (513bp) protein (171aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXG4_9CLOT
L2_039_000M1_scaffold_557_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12775..13923
DNA (1149bp) protein (383aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH48_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY41463.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_557_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13991..14512
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IME1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41464.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_557_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..16028
DNA (1497bp) protein (499aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHB6_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY41465.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_557_18
unknown

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16284..16856
DNA (573bp) protein (191aa)

This feature has no annotations

L2_039_000M1_scaffold_557_19
unknown

Not on your lists

17308..17781
DNA (474bp) protein (158aa)

This feature has no annotations

L2_039_000M1_scaffold_557_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17794..18192)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5Q2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44232.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_557_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18296..19744)
DNA (1449bp) protein (483aa)
oadA; pyruvate carboxylase subunit B (EC:4.1.1.3)
Pyruvate carboxylase subunit B n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPW6_9CLOT
Pyruvate carboxylase subunit B {ECO:0000313|EMBL:CCY44233.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_557_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20223..21233)
DNA (1011bp) protein (337aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV55_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY44234.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcriptional regulator
L2_039_000M1_scaffold_557_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21661..23016
DNA (1356bp) protein (452aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ41_9CLOT
hypothetical protein
Displaying 23 items

View Taxonomy