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L2_039_000M1_scaffold_653

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_653_1
unknown

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57..200
DNA (144bp) protein (48aa)

This feature has no annotations

L2_039_000M1_scaffold_653_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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435..551
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX69414.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Predicted sugar phosphatases of the HAD superfamily
L2_039_000M1_scaffold_653_3
unknown

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548..694
DNA (147bp) protein (49aa)

This feature has no annotations

L2_039_000M1_scaffold_653_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(689..1906)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WSU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07016.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_653_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1954..3375)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WCD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07015.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
iron-only hydrogenase maturation protein HydG
L2_039_000M1_scaffold_653_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3469..4527)
DNA (1059bp) protein (353aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Dorea sp. CAG:317 RepID=R6WJK7_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:CDD07014.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_039_000M1_scaffold_653_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4713..5657)
DNA (945bp) protein (315aa)
Transporter, auxin efflux carrier (AEC) family protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSM8_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDY31842.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted permeases
L2_039_000M1_scaffold_653_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5645..6493)
DNA (849bp) protein (283aa)
Macro domain protein n=2 Tax=Dorea RepID=A6BCW6_9FIRM
Macro domain protein {ECO:0000313|EMBL:EDM64283.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
macro domain protein
L2_039_000M1_scaffold_653_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6539..7033)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6S1V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74573.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
putative G/U mismatch-specific DNA glycosylase
L2_039_000M1_scaffold_653_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7583..10240
DNA (2658bp) protein (886aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Dorea sp. CAG:317 RepID=R6WJI8_9FIRM
L2_039_000M1_scaffold_653_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10277..12493
DNA (2217bp) protein (739aa)
Arylsulfatase n=2 Tax=Clostridiales RepID=B0NFM7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32606.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_039_000M1_scaffold_653_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12490..13743
DNA (1254bp) protein (418aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Bifunctional protein FolC n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR42_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:CDE17300.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L2_039_000M1_scaffold_653_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13730..13864
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NFM5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06655.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_653_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13889..15226
DNA (1338bp) protein (446aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridiales RepID=B0NFM4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32603.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_653_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15450..15728
DNA (279bp) protein (93aa)
Anti-sigma F factor antagonist n=2 Tax=Clostridiales RepID=B0NFM3_CLOSV
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
anti-anti-sigma factor
L2_039_000M1_scaffold_653_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15729..16184
DNA (456bp) protein (152aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=2 Tax=Clostridiales RepID=B0NFM2_CLOSV
Anti-sigma F factor {ECO:0000313|EMBL:EGN32601.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_000M1_scaffold_653_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16163..16876
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=B0NFM1_CLOSV
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
RNA polymerase sigma-F factor
L2_039_000M1_scaffold_653_18
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16951..17133
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74248.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L2_039_000M1_scaffold_653_19
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17136..17819
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9N763_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78913.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Stage V sporulation protein AA.
L2_039_000M1_scaffold_653_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17779..18195
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NFL8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06648.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_653_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18235..18696
DNA (462bp) protein (154aa)
Putative stage V sporulation protein AC n=2 Tax=Clostridiales RepID=B0NFL7_CLOSV
Putative stage V sporulation protein AC {ECO:0000313|EMBL:EDS06647.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
stage V sporulation AC, SpoVAC
L2_039_000M1_scaffold_653_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18693..19712
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=1 Tax=Dorea longicatena CAG:42 RepID=R7FR34_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDE17290.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Stage V sporulation protein AD (SpoVAD).
L2_039_000M1_scaffold_653_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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19712..20068
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VHM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91746.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
stage V sporulation protein AE
L2_039_000M1_scaffold_653_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20188..21828
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32593.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Na/Pi-cotransporter II-like protein
L2_039_000M1_scaffold_653_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21911..22195)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32592.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_653_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22439..23140
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=B0NK89_CLOSV
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS05316.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
two-component response regulator
L2_039_000M1_scaffold_653_27
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23113..24186
DNA (1074bp) protein (358aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C070_9CLOT
histidine kinase
L2_039_000M1_scaffold_653_28
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24349..25017
DNA (669bp) protein (223aa)
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XL66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07042.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_039_000M1_scaffold_653_29
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25018..27507
DNA (2490bp) protein (830aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WSW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07041.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC transporter permease
L2_039_000M1_scaffold_653_30
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27570..28265
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AC73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ27037.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy