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L2_039_000M1_scaffold_880

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_880_1
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1237)
DNA (1236bp) protein (412aa)
Amino acid carrier protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBL2_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDF09488.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
amino acid carrier protein
L2_039_000M1_scaffold_880_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1980..2408)
DNA (429bp) protein (143aa)
Aspartate carbamoyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7S2_9FIRM
Aspartate carbamoyltransferase {ECO:0000313|EMBL:CDF09489.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
aspartate carbamoyltransferase regulatory subunit
L2_039_000M1_scaffold_880_3
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2425..3345)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Aspartate carbamoyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Q3_9FIRM
pyrB; aspartate carbamoyltransferase catalytic subunit
L2_039_000M1_scaffold_880_4
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3508..4593
DNA (1086bp) protein (362aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA81_9FIRM
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CDF09491.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
tryptophanyl-tRNA synthetase II
L2_039_000M1_scaffold_880_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4701..5750)
DNA (1050bp) protein (350aa)
6-phosphogluconolactonase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBJ4_9FIRM
6-phosphogluconolactonase {ECO:0000313|EMBL:CDF09492.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
6-phosphogluconolactonase
L2_039_000M1_scaffold_880_6
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6103..6786
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09494.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Predicted Zn-dependent protease
L2_039_000M1_scaffold_880_7
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6926..7702
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Q8_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
RNA polymerase sporulation-specific sigma factor
L2_039_000M1_scaffold_880_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8055..8504
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA87_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
nrdR; NrdR family transcriptional regulator
L2_039_000M1_scaffold_880_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8572..9093
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09497.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_039_000M1_scaffold_880_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9203..10075
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Shikimate dehydrogenase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBM2_9FIRM
shikimate 5-dehydrogenase
L2_039_000M1_scaffold_880_11
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10068..10577
DNA (510bp) protein (170aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Shikimate kinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7T1_9FIRM
shikimate kinase
L2_039_000M1_scaffold_880_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10580..11023
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
3-dehydroquinate dehydratase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9R3_9FIRM
3-dehydroquinate dehydratase
L2_039_000M1_scaffold_880_13
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11201..11758)
DNA (558bp) protein (186aa)
Elongation factor P n=3 Tax=environmental samples RepID=R6JW74_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
elongation factor EF-P
L2_039_000M1_scaffold_880_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12295..13008)
DNA (714bp) protein (238aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Signal peptidase I n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBM8_9FIRM
signal peptidase I
L2_039_000M1_scaffold_880_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13084..15078)
DNA (1995bp) protein (665aa)
Molecular chaperone HtpG n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7T5_9FIRM
Molecular chaperone HtpG {ECO:0000313|EMBL:CDF09504.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
heat shock protein 90
L2_039_000M1_scaffold_880_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15284..15787)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09505.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_039_000M1_scaffold_880_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15931..16749)
DNA (819bp) protein (273aa)
Sulfonate/nitrate/taurine transport system permease protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA97_9FIRM
Sulfonate/nitrate/taurine transport system permease protein {ECO:0000313|EMBL:CDF09506.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
sulfonate/nitrate/taurine transport system permease
L2_039_000M1_scaffold_880_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16746..17534)
DNA (789bp) protein (263aa)
ABC-type nitrate/sulfonate/taurine/bicarbonate transport system protein ATPase components n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBK9_9FIRM
ABC-type nitrate/sulfonate/taurine/bicarbonate transport system protein ATPase components {ECO:0000313|EMBL:CDF09507.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_039_000M1_scaffold_880_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18082..18825
DNA (744bp) protein (248aa)
exopolysaccharide tyrosine-protein kinase (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBN3_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDF09508.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L2_039_000M1_scaffold_880_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18857..19786
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09509.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
polysaccharide biosynthesis protein
L2_039_000M1_scaffold_880_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19845..21284
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09510.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_039_000M1_scaffold_880_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21328..21972
DNA (645bp) protein (215aa)
Glycosyltransferase group 2 family protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAA2_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDF09511.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Glycosyltransferases, probably involved in cell wall biogenesis
Displaying 22 items

View Taxonomy