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L2_039_000M1_scaffold_887

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_887_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

L2_039_000M1_scaffold_887_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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234..500
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A7M0K7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61703.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_039_000M1_scaffold_887_3
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(620..2191)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6SYP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC51727.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
hypothetical protein
L2_039_000M1_scaffold_887_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2228..4156)
DNA (1929bp) protein (643aa)
SusD family n=8 Tax=Bacteroides RepID=D6D6J1_9BACE
SusD family.
Uncharacterized protein {ECO:0000313|EMBL:EGN03068.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L2_039_000M1_scaffold_887_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4170..7415)
DNA (3246bp) protein (1082aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M0K4_BACOV
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO10998.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Outer membrane receptor for ferrienterochelin and colicins
L2_039_000M1_scaffold_887_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7452..8843)
DNA (1392bp) protein (464aa)
Predicted glycosyl hydrolase n=11 Tax=Bacteroides RepID=D6D6I9_9BACE
Predicted glycosyl hydrolase
Glycosyl hydrolase family 76 {ECO:0000313|EMBL:EDO10997.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L2_039_000M1_scaffold_887_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8858..10105)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A7M0K2_BACOV
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:EFF51903.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L2_039_000M1_scaffold_887_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10124..12097)
DNA (1974bp) protein (658aa)
Putative lipoprotein n=2 Tax=Bacteroides ovatus RepID=D4WHM5_BACOV
Concanavalin A-like lectin/glucanases superfamily protein {ECO:0000313|EMBL:KDS18109.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L2_039_000M1_scaffold_887_9
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12286..13254)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C8S8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31077.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Signal transduction histidine kinase
L2_039_000M1_scaffold_887_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13239..16187)
DNA (2949bp) protein (983aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides ovatus RepID=A7M0K0_BACOV
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO10994.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
two-component system sensor histidine kinase/response regulator
L2_039_000M1_scaffold_887_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16398..18680
DNA (2283bp) protein (761aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9I7X5_BACOV
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:KDS18111.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
alpha-1,2-mannosidase
L2_039_000M1_scaffold_887_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18734..19684
DNA (951bp) protein (317aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A4G9_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO77737.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_039_000M1_scaffold_887_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19764..20894
DNA (1131bp) protein (377aa)
Glycosyl hydrolase family 76 n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M0J7_BACOV
Glycosyl hydrolase family 76 {ECO:0000313|EMBL:EDO10991.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hydrolase
L2_039_000M1_scaffold_887_14
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20954..22399
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=3 Tax=Bacteroides RepID=D4WHN0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96462.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L2_039_000M1_scaffold_887_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22873..24033
DNA (1161bp) protein (387aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M0J4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10988.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Predicted glycosylase
L2_039_000M1_scaffold_887_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24335..26605)
DNA (2271bp) protein (757aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WHN2_BACOV
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFF51911.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-1,2-mannosidase, putative
L2_039_000M1_scaffold_887_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26825..27496)
DNA (672bp) protein (224aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EFF51912.1}; EC=5.4.99.- {ECO:0000313|EMBL:EFF51912.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Ribosomal large subunit pseudouridine synthase D n=15 Tax=Bacteroides RepID=D6D6H9_9BACE
L2_039_000M1_scaffold_887_18
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27506..28252)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=17 Tax=Bacteroides RepID=D6D6H8_9BACE
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CDB57852.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L2_039_000M1_scaffold_887_19
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28269..28859)
DNA (591bp) protein (197aa)
Transcriptional regulator n=17 Tax=Bacteroides RepID=D6D6H7_9BACE
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEO50338.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Displaying 19 items

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