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L2_039_000M1_scaffold_996

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_996_1
unknown

Not on your lists

comp(3..245)
DNA (243bp) protein (81aa)

This feature has no annotations

L2_039_000M1_scaffold_996_2
unknown

Not on your lists

comp(248..388)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_039_000M1_scaffold_996_3
unknown

Not on your lists

comp(385..849)
DNA (465bp) protein (155aa)

This feature has no annotations

L2_039_000M1_scaffold_996_4
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(818..1309)
DNA (492bp) protein (164aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
Cytosine-specific methyltransferase n=4 Tax=Coriobacteriaceae RepID=F7UYG7_EEGSY
Dcm; site-specific DNA methylase
L2_039_000M1_scaffold_996_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1623..2147)
DNA (525bp) protein (175aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Type II cytosine-5 DNA methyltransferase of unknown recognition sequence (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3B1J4_BIFLN
L2_039_000M1_scaffold_996_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2144..2314)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NFW5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54335.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_000M1_scaffold_996_7
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2311..2598)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D9N3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86543.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
gp62 protein
L2_039_000M1_scaffold_996_8
unknown

Not on your lists

comp(2595..2792)
DNA (198bp) protein (66aa)

This feature has no annotations

L2_039_000M1_scaffold_996_9
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2789..3472)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGG3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67414.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
L2_039_000M1_scaffold_996_10
unknown

Not on your lists

comp(3475..3669)
DNA (195bp) protein (65aa)

This feature has no annotations

L2_039_000M1_scaffold_996_11
unknown

Not on your lists

comp(3675..3794)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_039_000M1_scaffold_996_12
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3794..4102)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0Z7U3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83470.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
hypothetical protein
L2_039_000M1_scaffold_996_13
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4112..4537)
DNA (426bp) protein (142aa)
Single-stranded DNA-binding protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDU1_9ACTN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
single-strand binding protein
L2_039_000M1_scaffold_996_14
unknown

Not on your lists

comp(4513..4704)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_039_000M1_scaffold_996_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4733..5569)
DNA (837bp) protein (279aa)
Recombinase, phage RecT family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRU3_BIFBR
Putative phage recombination and repair protein {ECO:0000313|EMBL:BAR00339.1}; Recombinase, phage RecT family {ECO:0000313|EMBL:EFE88156.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Recombinational DNA repair protein RecT
L2_039_000M1_scaffold_996_16
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5566..6537)
DNA (972bp) protein (324aa)
YqaJ n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CBT1_9ACTN
YqaJ {ECO:0000313|EMBL:CDD75561.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
YqaJ-like viral recombinase family protein
L2_039_000M1_scaffold_996_17
unknown

Not on your lists

comp(6527..7009)
DNA (483bp) protein (161aa)

This feature has no annotations

L2_039_000M1_scaffold_996_18
unknown

Not on your lists

comp(6991..7305)
DNA (315bp) protein (105aa)

This feature has no annotations

L2_039_000M1_scaffold_996_19
unknown

Not on your lists

comp(7684..8043)
DNA (360bp) protein (120aa)

This feature has no annotations

L2_039_000M1_scaffold_996_20
unknown

Not on your lists

comp(8610..8921)
DNA (312bp) protein (104aa)

This feature has no annotations

L2_039_000M1_scaffold_996_21
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8944..9702)
DNA (759bp) protein (253aa)
Phage antirepressor protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAL4_9ACTN
Phage antirepressor protein {ECO:0000313|EMBL:EEA90687.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Uncharacterized phage-encoded protein
L2_039_000M1_scaffold_996_22
unknown

Not on your lists

9755..10042
DNA (288bp) protein (96aa)

This feature has no annotations

L2_039_000M1_scaffold_996_23
unknown

Not on your lists

comp(10001..10192)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_039_000M1_scaffold_996_24
unknown

Not on your lists

10276..10446
DNA (171bp) protein (57aa)

This feature has no annotations

L2_039_000M1_scaffold_996_25
unknown

Not on your lists

10991..11176
DNA (186bp) protein (62aa)

This feature has no annotations

L2_039_000M1_scaffold_996_26
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11185..11820
DNA (636bp) protein (212aa)
Transcriptional regulator, XRE family n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NBT7_CORGP
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AEB06896.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L2_039_000M1_scaffold_996_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12066..13082
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8C9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44801.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L2_039_000M1_scaffold_996_28
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13179..13508)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGI6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67437.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L2_039_000M1_scaffold_996_29
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13541..14743
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGI7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67438.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
integrase
Displaying 29 items

View Taxonomy