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L2_039_000M1_scaffold_157

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_157_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..467
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06446.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
conserved hypothetical protein (putative transposase or invertase)
L2_039_000M1_scaffold_157_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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470..1048
DNA (579bp) protein (193aa)
Putative rRNA methylase n=1 Tax=Dorea sp. CAG:317 RepID=R6W834_9FIRM
Putative rRNA methylase {ECO:0000313|EMBL:CDD07273.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L2_039_000M1_scaffold_157_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1382..2713
DNA (1332bp) protein (444aa)
Magnesium transporter n=1 Tax=Dorea sp. CAG:317 RepID=R6WK50_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Mg2+ transporter (mgtE)
L2_039_000M1_scaffold_157_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2765..3952)
DNA (1188bp) protein (396aa)
Alcohol dehydrogenase (NADP(+)) (EC:1.1.1.2)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KN64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33974.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_000M1_scaffold_157_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4118..5428
DNA (1311bp) protein (437aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DBF4_9FIRM
L2_039_000M1_scaffold_157_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5430..7184
DNA (1755bp) protein (585aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
indolepyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7C4_9FIRM
L2_039_000M1_scaffold_157_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7184..7753
DNA (570bp) protein (190aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Putative indolepyruvate ferredoxin oxidoreductase, beta subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGN6_9FIRM
Putative indolepyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EDM63139.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L2_039_000M1_scaffold_157_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7764..8183
DNA (420bp) protein (140aa)
ACT domain protein n=2 Tax=Clostridiales RepID=B0NE26_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN33948.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
amino acid-binding ACT domain-containing protein
L2_039_000M1_scaffold_157_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8199..9530
DNA (1332bp) protein (444aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NE25_CLOSV
L2_039_000M1_scaffold_157_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9548..9991
DNA (444bp) protein (148aa)
ACT domain protein n=2 Tax=Dorea RepID=B0G7C1_9FIRM
ACT domain protein {ECO:0000313|EMBL:EDR45575.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
amino acid-binding ACT domain-containing protein
L2_039_000M1_scaffold_157_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10150..11142
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0N9N1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08596.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_157_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11193..12524
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9N0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08595.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted metallopeptidase (DUF2201).
L2_039_000M1_scaffold_157_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12515..14020
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9M9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08594.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATPase family associated with various cellular activities (AAA).
L2_039_000M1_scaffold_157_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14055..14621
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Dorea sp. CAG:317 RepID=R6WKK2_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_157_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14692..15645
DNA (954bp) protein (318aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9F2_CLOSV
L2_039_000M1_scaffold_157_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15671..16411
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9F3_CLOSV
L2_039_000M1_scaffold_157_17
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16456..17616
DNA (1161bp) protein (387aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TDH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC56787.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L2_039_000M1_scaffold_157_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17630..18811
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9F5_CLOSV
thiazole biosynthesis/tRNA modification protein ThiI
L2_039_000M1_scaffold_157_19
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18889..19125)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NAX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80440.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_039_000M1_scaffold_157_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19268..20557
DNA (1290bp) protein (430aa)
tRNA methylthiotransferase YqeV n=2 Tax=Clostridiales RepID=B0N9F7_CLOSV
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EGN39768.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
MiaB-like tRNA modifying enzyme
L2_039_000M1_scaffold_157_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20615..20878
DNA (264bp) protein (88aa)
UPF0297 protein CLOSCI_00029 n=2 Tax=Clostridiales RepID=B0N9F8_CLOSV
UPF0297 protein CLOSCI_00029 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_157_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20893..21306
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=B0N9G3_CLOSV
conserved hypothetical protein TIGR00250
L2_039_000M1_scaffold_157_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21312..21572
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BHA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62864.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Protein of unknown function (DUF1292).
L2_039_000M1_scaffold_157_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21579..22034
DNA (456bp) protein (152aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridiales RepID=B0N9G5_CLOSV
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDS08714.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Fe2+/Zn2+ uptake regulation proteins
L2_039_000M1_scaffold_157_25
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22065..23732
DNA (1668bp) protein (556aa)
Ribonuclease J n=1 Tax=Dorea sp. 5-2 RepID=R9NBV3_9FIRM
Ribonuclease J {ECO:0000313|EMBL:EOS80446.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_039_000M1_scaffold_157_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23812..24453
DNA (642bp) protein (214aa)
O-methyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHA1_9FIRM
O-methyltransferase {ECO:0000313|EMBL:EDM62861.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted O-methyltransferase
L2_039_000M1_scaffold_157_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24494..25735
DNA (1242bp) protein (414aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDM62860.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM62860.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHA0_9FIRM
L2_039_000M1_scaffold_157_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25689..26468
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9A9_CLOSV
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sigK; RNA polymerase sigma-28 factor SigK
L2_039_000M1_scaffold_157_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26720..28285
DNA (1566bp) protein (522aa)
Mg chelatase-like protein n=2 Tax=Clostridiales RepID=B0N9B2_CLOSV
Mg chelatase-like protein {ECO:0000313|EMBL:EDS08726.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Mg chelatase-related protein
L2_039_000M1_scaffold_157_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28319..29425
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FYS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20379.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DNA protecting protein DprA
Displaying items 1-30 of 56 in total

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