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L2_039_000M1_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_235_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(88..1395)
DNA (1308bp) protein (436aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RDI1_9FIRM
GMP synthase
L2_039_000M1_scaffold_235_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1472..2662)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XK60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06757.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_235_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(2789..3319)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41484.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_039_000M1_scaffold_235_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3528..6755
DNA (3228bp) protein (1076aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large subunit n=1 Tax=Dorea sp. CAG:317 RepID=R6WIT0_9FIRM
L2_039_000M1_scaffold_235_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6855..7145)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BDC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20997.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L2_039_000M1_scaffold_235_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7146..7868)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
NAD-dependent protein deacetylase n=1 Tax=Dorea sp. CAG:317 RepID=R6WJL4_9FIRM
NAD-dependent protein deacetylase
L2_039_000M1_scaffold_235_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7968..8612
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EFA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38002.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_039_000M1_scaffold_235_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8629..9498)
DNA (870bp) protein (290aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=2 Tax=Dorea sp. 5-2 RepID=R9NCC1_9FIRM
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EOS80616.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_039_000M1_scaffold_235_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9513..10184)
DNA (672bp) protein (224aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EDS06708.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDS06708.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=2 Tax=Clostridiales RepID=B0NFS8_CLOSV
L2_039_000M1_scaffold_235_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10363..11481
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFS9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06709.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_235_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11833..12234)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC33_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02396.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_000M1_scaffold_235_12
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12410..12763)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30961.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Antitoxin of toxin-antitoxin stability system
L2_039_000M1_scaffold_235_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12853..13404)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74360.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L2_039_000M1_scaffold_235_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13479..13676)
DNA (198bp) protein (66aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZL4_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL27224.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_039_000M1_scaffold_235_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13815..14027)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYI0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22683.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_039_000M1_scaffold_235_16
unknown

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comp(14015..14287)
DNA (273bp) protein (91aa)

This feature has no annotations

L2_039_000M1_scaffold_235_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14365..16257)
DNA (1893bp) protein (631aa)
ABC transporter permease protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W7I0_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD07018.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC-type spermidine/putrescine transport system, permease component II
L2_039_000M1_scaffold_235_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16260..17096)
DNA (837bp) protein (279aa)
ABC transporter permease protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WJL0_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD07019.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC-type spermidine/putrescine transport system, permease component I
L2_039_000M1_scaffold_235_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17096..18673)
DNA (1578bp) protein (526aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Polyamine ABC transporter ATP-binding protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WCE2_9FIRM
potA; spermidine/putrescine ABC transporter ATP-binding protein
L2_039_000M1_scaffold_235_20
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18740..19273)
DNA (534bp) protein (178aa)
Cupin domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WSV1_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDD07021.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
XRE family transcriptional regulator
L2_039_000M1_scaffold_235_21
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19444..20235)
DNA (792bp) protein (264aa)
4Fe-4S binding domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WS15_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDD06751.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_235_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20228..21406)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NJ16_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05461.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_235_23
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21488..22231)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EDI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97915.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
putative Xre family DNA-binding protein
L2_039_000M1_scaffold_235_24
unknown

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22421..22522
DNA (102bp) protein (34aa)

This feature has no annotations

L2_039_000M1_scaffold_235_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(22519..22878)
DNA (360bp) protein (120aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWT0_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ33285.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcriptional regulator
L2_039_000M1_scaffold_235_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

23057..23518
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R3J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33284.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
spo0A; stage 0 sporulation protein A
L2_039_000M1_scaffold_235_27
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23639..26410)
DNA (2772bp) protein (924aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WR38_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EEG91395.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
small GTP-binding protein domain
L2_039_000M1_scaffold_235_28
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26448..27104)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WIT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06764.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterised protein family (UPF0153).
L2_039_000M1_scaffold_235_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27101..27685)
DNA (585bp) protein (195aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0K0_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:CDE20999.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L2_039_000M1_scaffold_235_30
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27687..28442)
DNA (756bp) protein (252aa)
UPF0246 protein C818_00526 n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MVA8_9FIRM
UPF0246 protein C818_00526 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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