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L2_039_000M1_scaffold_329

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_329_1
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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46..879
DNA (834bp) protein (278aa)
ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C6I6_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG72321.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
binding-protein-dependent transporters inner membrane component
L2_039_000M1_scaffold_329_2
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(952..3573)
DNA (2622bp) protein (874aa)
endo-1,4-beta-xylanase n=1 Tax=Agromyces subbeticus RepID=UPI0003B35149
Uncharacterized protein {ECO:0000313|EMBL:KFI81149.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophilum.;"
hypothetical protein
L2_039_000M1_scaffold_329_3
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3882..6278
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82452.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_039_000M1_scaffold_329_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6452..18502)
DNA (12051bp) protein (4017aa)
Pilin isopeptide linkage domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMC9_9FIRM
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EDK24345.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Fibronectin-binding protein
L2_039_000M1_scaffold_329_5
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18697..19488)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79747.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
LytT; response regulator of the LytR/AlgR family
L2_039_000M1_scaffold_329_6
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19469..21265)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79746.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
signal transduction histidine kinase
L2_039_000M1_scaffold_329_7

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21405..21650
DNA (246bp) protein (82aa)
Protein containing Helix-turn-helix type 3 domain protein n=1 Tax=human gut metagenome RepID=K1SKY9_9ZZZZ
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:EKC58258.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_039_000M1_scaffold_329_8
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21711..22550)
DNA (840bp) protein (280aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V8X5_CLOSS
UgpQ; glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:BAK46585.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L2_039_000M1_scaffold_329_9
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(22572..23612)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MM53_CALBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM61276.1}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
L2_039_000M1_scaffold_329_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23926..25026)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23684.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
fic-3; fic family protein
L2_039_000M1_scaffold_329_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25481..26353)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NEN2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30896.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_329_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26389..27675)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Clostridiales RepID=B0NEN3_CLOSV
Seryl-tRNA synthetase {ECO:0000313|EMBL:EGN30897.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_000M1_scaffold_329_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27739..28275)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NEN4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06922.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_329_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28297..29211)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WRP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06631.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ParB-like partition proteins
L2_039_000M1_scaffold_329_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29244..30014)
DNA (771bp) protein (257aa)
Sporulation initiation inhibitor protein Soj n=2 Tax=Clostridiales RepID=B0NEN6_CLOSV
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EDS06924.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATPases involved in chromosome partitioning
L2_039_000M1_scaffold_329_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30108..30821)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPS8_9FIRM
L2_039_000M1_scaffold_329_17
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30889..31671)
DNA (783bp) protein (261aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Dorea sp. 5-2 RepID=R9MNS0_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
glucose-inhibited division protein A
Displaying 17 items

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