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L2_039_000M1_scaffold_336

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_336_1
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..956
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DBR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73316.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted permease.
L2_039_000M1_scaffold_336_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1111..3168
DNA (2058bp) protein (686aa)
Molecular chaperone HtpG n=1 Tax=Dorea sp. 5-2 RepID=R9NGZ2_9FIRM
Molecular chaperone HtpG {ECO:0000313|EMBL:EOS79262.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Molecular chaperone, HSP90 family
L2_039_000M1_scaffold_336_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(3257..4120)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45775.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_039_000M1_scaffold_336_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4487..5995
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07323.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_336_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5988..6461)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WD32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07320.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_336_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6583..7380
DNA (798bp) protein (266aa)
GDSL-like protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJR5_CLOSV
GDSL-like protein {ECO:0000313|EMBL:EDS05142.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Lysophospholipase L1 and related esterases
L2_039_000M1_scaffold_336_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7380..7865
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34819.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
lipoprotein
L2_039_000M1_scaffold_336_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7882..9282
DNA (1401bp) protein (467aa)
MBOAT family protein n=2 Tax=Clostridiales RepID=B0NJR3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34818.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted membrane protein involved in D-alanine export
L2_039_000M1_scaffold_336_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9291..10241
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJR2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05139.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_336_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10186..10959
DNA (774bp) protein (258aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV47_9FIRM
pseudouridylate synthase
L2_039_000M1_scaffold_336_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10907..12880
DNA (1974bp) protein (658aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV46_9FIRM
L2_039_000M1_scaffold_336_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12896..14437
DNA (1542bp) protein (514aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV45_9FIRM
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:EGN34814.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_039_000M1_scaffold_336_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14541..15791
DNA (1251bp) protein (417aa)
Transporter, CPA2 family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJQ8_CLOSV
Transporter, CPA2 family {ECO:0000313|EMBL:EDS05135.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L2_039_000M1_scaffold_336_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15894..17597
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJQ7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05134.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Subtilase family.
L2_039_000M1_scaffold_336_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17611..17901
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NJQ6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05133.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_336_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17943..18488
DNA (546bp) protein (182aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJQ5_CLOSV
peptidase A8 signal peptidase II
L2_039_000M1_scaffold_336_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18436..19377)
DNA (942bp) protein (314aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
4-phosphoerythronate dehydrogenase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVY5_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDE19010.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L2_039_000M1_scaffold_336_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19683..20555)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NJQ0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05127.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Peptidase C39 family.
L2_039_000M1_scaffold_336_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20862..21407)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BMH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD16344.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Uncharacterized protein conserved in cyanobacteria
L2_039_000M1_scaffold_336_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21465..22067)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4L9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73012.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_039_000M1_scaffold_336_21
unknown

Not on your lists

22567..22737
DNA (171bp) protein (57aa)

This feature has no annotations

L2_039_000M1_scaffold_336_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23008..24741)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WIS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06754.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC-type multidrug transport system, ATPase and permease components
L2_039_000M1_scaffold_336_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24967..25275
DNA (309bp) protein (103aa)
Thioredoxin n=1 Tax=Dorea sp. CAG:317 RepID=R6W8F1_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
thioredoxin
L2_039_000M1_scaffold_336_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25305..25979)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39134.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Crp family transcriptional regulator
L2_039_000M1_scaffold_336_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26164..27744
DNA (1581bp) protein (527aa)
DEAD/DEAH box helicase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA62_CLOSV
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDS08555.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Superfamily II DNA and RNA helicases
L2_039_000M1_scaffold_336_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27760..28353
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NA61_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08554.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
nicotinamide mononucleotide adenylyltransferase
L2_039_000M1_scaffold_336_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28571..29371
DNA (801bp) protein (267aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Clostridiales RepID=B0NA59_CLOSV
Dihydrodipicolinate reductase
L2_039_000M1_scaffold_336_28
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29406..29732
DNA (327bp) protein (109aa)
UPF0145 protein C817_00680 n=1 Tax=Dorea sp. 5-2 RepID=R9NEQ8_9FIRM
UPF0145 protein C817_00680 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_039_000M1_scaffold_336_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29816..30001
DNA (186bp) protein (62aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=B0NDX7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39122.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ferredoxin
L2_039_000M1_scaffold_336_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30176..30946
DNA (771bp) protein (257aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NDX6_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS07311.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC transporter
Displaying items 1-30 of 39 in total

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