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L2_039_000M1_scaffold_505

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_505_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..361)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41759.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_505_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(408..1331)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41761.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_505_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1579..2196
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41763.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted integral membrane protein
L2_039_000M1_scaffold_505_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2415..3023
DNA (609bp) protein (203aa)
50S ribosomal protein L25 n=1 Tax=Clostridium sp. CAG:7 RepID=R5II61_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosomal protein L25, Ctc-form
L2_039_000M1_scaffold_505_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3091..3726)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41767.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_505_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..4284)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41769.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_505_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4412..4708)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41770.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_505_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5418..6119)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41773.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_000M1_scaffold_505_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6356..7600)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41775.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_000M1_scaffold_505_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7663..7836
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3U6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69682.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L2_039_000M1_scaffold_505_11
unknown

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comp(8474..9001)
DNA (528bp) protein (176aa)

This feature has no annotations

L2_039_000M1_scaffold_505_12
Mogibacterium timidum, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9288..11108
DNA (1821bp) protein (607aa)
Repeat, TIGR02543 family n=1 Tax=Mogibacterium sp. CM50 RepID=J5WMC9_9FIRM
Repeat, TIGR02543 family {ECO:0000313|EMBL:EUC52688.1}; TaxID=1401079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis; Mogibacterium.;" source="Mogibacterium timidum ATCC 33093.;"
hypothetical protein
L2_039_000M1_scaffold_505_13
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11236..11973
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N0R4_SLAHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV21142.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L2_039_000M1_scaffold_505_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11976..12992
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00977.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
membrane protein
L2_039_000M1_scaffold_505_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13154..14374
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WUM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07761.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
MatE efflux family protein
L2_039_000M1_scaffold_505_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14579..15334
DNA (756bp) protein (252aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YT64_9FIRM
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:EHM44188.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
mta; HTH-type transcriptional activator
L2_039_000M1_scaffold_505_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15455..16327
DNA (873bp) protein (291aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Dorea sp. CAG:317 RepID=R6WA93_9FIRM
L2_039_000M1_scaffold_505_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16577..17377
DNA (801bp) protein (267aa)
Short chain dehydrogenase n=1 Tax=Dorea sp. CAG:317 RepID=R6WLT8_9FIRM
Short chain dehydrogenase {ECO:0000313|EMBL:CDD07904.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L2_039_000M1_scaffold_505_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17471..18169)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XK62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06762.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_505_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18240..19157)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KT88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37805.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
LysR; transcriptional regulator
L2_039_000M1_scaffold_505_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19354..20811
DNA (1458bp) protein (486aa)
Sodium:sulfate symporter transmembrane region n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NK78_CLOSV
Sodium:sulfate symporter transmembrane region {ECO:0000313|EMBL:EDS05305.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sodium/sulfate symporter
L2_039_000M1_scaffold_505_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20872..22134
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KT35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37803.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
L2_039_000M1_scaffold_505_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22154..22711
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KT34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37802.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Chorismate mutase type II./ACT domain.
L2_039_000M1_scaffold_505_24
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22895..24304
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37923.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
amino acid carrier protein
Displaying 24 items

View Taxonomy