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L2_039_000M1_scaffold_729

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_729_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..521)
DNA (519bp) protein (173aa)
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=2 Tax=Clostridiales RepID=B0NAG5_CLOSV
Stage IV sporulation protein B {ECO:0000313|EMBL:EGN30628.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_000M1_scaffold_729_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(608..2281)
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=2 Tax=Clostridiales RepID=B0NAG4_CLOSV
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA replication and repair protein RecN
L2_039_000M1_scaffold_729_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2290..2739)
DNA (450bp) protein (150aa)
Arginine repressor n=2 Tax=Clostridiales RepID=B0NAG3_CLOSV
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
transcriptional regulator, ArgR family
L2_039_000M1_scaffold_729_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2743..3576)
DNA (834bp) protein (278aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Clostridiales RepID=F7KQ81_9FIRM
L2_039_000M1_scaffold_729_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3592..4401)
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EDS08119.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDS08119.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAG1_CLOSV
hemolysin TlyA family protein
L2_039_000M1_scaffold_729_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4427..6298)
DNA (1872bp) protein (624aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Clostridiales RepID=B0NAG0_CLOSV
1-deoxy-D-xylulose-5-phosphate synthase
L2_039_000M1_scaffold_729_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6324..7226)
DNA (903bp) protein (301aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAF9_CLOSV
Polyprenyl synthetase {ECO:0000313|EMBL:EDS08117.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_039_000M1_scaffold_729_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7210..7443)
DNA (234bp) protein (78aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Exonuclease VII small subunit. (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=Clostridiales RepID=B0NAF8_CLOSV
L2_039_000M1_scaffold_729_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7436..8647)
DNA (1212bp) protein (404aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAF7_CLOSV
L2_039_000M1_scaffold_729_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8664..9062)
DNA (399bp) protein (133aa)
N utilization substance protein B homolog n=1 Tax=Dorea sp. CAG:317 RepID=R6W5X0_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
transcription antitermination factor NusB
L2_039_000M1_scaffold_729_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9063..9446)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAF5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30618.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_729_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9515..11116)
DNA (1602bp) protein (534aa)
Peptide chain release factor 3 n=2 Tax=Clostridiales RepID=B0NAF4_CLOSV
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
bacterial peptide chain release factor 3 (bRF-3)
L2_039_000M1_scaffold_729_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11193..14012)
DNA (2820bp) protein (940aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0YZ08_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EGB93014.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted permease.
L2_039_000M1_scaffold_729_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14009..14683)
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YZ07_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGB93013.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_039_000M1_scaffold_729_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14759..15394)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAF3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08111.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_729_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15412..16023)
DNA (612bp) protein (204aa)
Putative stage III sporulation protein AG n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3R7_9CLOT
Putative stage III sporulation protein AG {ECO:0000313|EMBL:EEG73166.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_039_000M1_scaffold_729_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15992..16351)
DNA (360bp) protein (120aa)
Putative stage III sporulation protein AF n=2 Tax=Clostridiales RepID=B0NAF1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30614.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Stage III sporulation protein AF (Spore_III_AF).
L2_039_000M1_scaffold_729_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16382..17530)
DNA (1149bp) protein (383aa)
Putative stage III sporulation protein AE n=2 Tax=Clostridiales RepID=B0NAF0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30613.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Stage III sporulation protein AE (spore_III_AE).
L2_039_000M1_scaffold_729_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17527..17913)
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=2 Tax=Clostridiales RepID=B0NAE9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30612.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
stage III sporulation protein AD
L2_039_000M1_scaffold_729_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17953..18147)
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=2 Tax=Clostridiales RepID=B0NAE8_CLOSV
Stage III sporulation protein AC {ECO:0000313|EMBL:EDS08106.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
stage III sporulation protein AC
L2_039_000M1_scaffold_729_21
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18194..18715)
DNA (522bp) protein (174aa)
Putative stage III sporulation protein AB n=2 Tax=Clostridiales RepID=B0NAE7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30610.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
sporulation stage III protein AB
L2_039_000M1_scaffold_729_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18718..19005)
DNA (288bp) protein (96aa)
Stage III sporulation protein AA n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2J6_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:CDE21161.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
stage III sporulation protein AA
Displaying 22 items

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