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L2_039_000M1_scaffold_808

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_808_1
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1279)
DNA (1278bp) protein (426aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Dorea sp. 5-2 RepID=R9N9V3_9FIRM
L2_039_000M1_scaffold_808_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1328..1969)
DNA (642bp) protein (214aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=2 Tax=Dorea RepID=G1WLU6_9FIRM
L2_039_000M1_scaffold_808_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1992..3254)
DNA (1263bp) protein (421aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Clostridiales RepID=B0NAJ8_CLOSV
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_000M1_scaffold_808_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3337..3900)
DNA (564bp) protein (188aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Holliday junction resolvase RecU n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2C6_9FIRM
Penicillin-binding protein-related factor A, putative recombinase
L2_039_000M1_scaffold_808_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3858..4886)
DNA (1029bp) protein (343aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Pseudouridine synthase n=2 Tax=Dorea RepID=A6BDV6_9FIRM
RluA family pseudouridine synthase
L2_039_000M1_scaffold_808_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4897..5472)
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAJ5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08153.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_808_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5515..6276)
DNA (762bp) protein (254aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridiales RepID=B0NAJ4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30247.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Short-chain dehydrogenases of various substrate specificities
L2_039_000M1_scaffold_808_8
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6307..8244)
DNA (1938bp) protein (646aa)
UPF0313 protein BN605_01826 n=1 Tax=Dorea sp. CAG:317 RepID=R6WGG9_9FIRM
UPF0313 protein BN605_01826 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_039_000M1_scaffold_808_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8245..8952)
DNA (708bp) protein (236aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Clostridiales RepID=B0NAJ2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30245.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
HAD family hydrolase
L2_039_000M1_scaffold_808_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8930..9658)
DNA (729bp) protein (243aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQB1_9FIRM
L2_039_000M1_scaffold_808_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9658..11040)
DNA (1383bp) protein (461aa)
NOL1/NOP2/sun family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDV1_9FIRM
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EDM63790.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_039_000M1_scaffold_808_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11120..11833)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30242.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
peptidase M23
L2_039_000M1_scaffold_808_13
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11926..13374)
DNA (1449bp) protein (483aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Xaa-His dipeptidase n=1 Tax=Dorea sp. 5-2 RepID=R9NA85_9FIRM
Xaa-His dipeptidase {ECO:0000313|EMBL:EOS79861.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_039_000M1_scaffold_808_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13493..14437
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23140.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_039_000M1_scaffold_808_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14426..15067)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAI6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08144.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_808_16
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15064..15561)
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Dorea sp. 5-2 RepID=R9N9U1_9FIRM
L2_039_000M1_scaffold_808_17
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15555..16124)
DNA (570bp) protein (190aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EEG75777.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEG75777.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
RNA methyltransferase, RsmD family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWD0_9CLOT
RNA methyltransferase, RsmD family
L2_039_000M1_scaffold_808_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16121..17530)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63782.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted ATPase of the ABC class
Displaying 18 items

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