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L2_039_000M1_scaffold_949

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_949_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..503)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06446.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
conserved hypothetical protein (putative transposase or invertase)
L2_039_000M1_scaffold_949_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(844..5367)
DNA (4524bp) protein (1508aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA polymerase III polC-type n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNI8_9FIRM
DNA polymerase III subunit alpha
L2_039_000M1_scaffold_949_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5360..6418)
DNA (1059bp) protein (353aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Dorea sp. CAG:317 RepID=R6XLQ2_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_039_000M1_scaffold_949_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6506..6967)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NE57_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN33991.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_949_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7071..7304)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74499.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_039_000M1_scaffold_949_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7477..7824
DNA (348bp) protein (116aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NE59_CLOSV
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS07077.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
XRE family transcriptional regulator
L2_039_000M1_scaffold_949_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7829..8563)
DNA (735bp) protein (245aa)
CobB/CobQ-like protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NE60_CLOSV
CobB/CobQ-like protein {ECO:0000313|EMBL:EDS07078.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted glutamine amidotransferase
L2_039_000M1_scaffold_949_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8563..9903)
DNA (1341bp) protein (447aa)
Mur ligase middle domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33995.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
UDP-N-acetylmuramyl tripeptide synthase
L2_039_000M1_scaffold_949_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9908..10870)
DNA (963bp) protein (321aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=2 Tax=Dorea RepID=A6BGP7_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EDM63150.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L2_039_000M1_scaffold_949_10
unknown

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11061..11228
DNA (168bp) protein (56aa)

This feature has no annotations

L2_039_000M1_scaffold_949_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11423..12571
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KN90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34006.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_000M1_scaffold_949_12
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12573..13496
DNA (924bp) protein (308aa)
TIGR01212 family radical SAM protein n=1 Tax=Dorea sp. 5-2 RepID=R9NC87_9FIRM
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:EOS80586.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
radical SAM protein, TIGR01212 family
L2_039_000M1_scaffold_949_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13499..14011
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NE75_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07093.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_949_14
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14026..14577
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80584.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Chromate transporter
L2_039_000M1_scaffold_949_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14574..15131
DNA (558bp) protein (186aa)
Chromate transport protein n=2 Tax=Clostridiales RepID=B0NE77_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN34010.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
chromate transporter
L2_039_000M1_scaffold_949_16
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15171..15383)
DNA (213bp) protein (71aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EDR45873.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDR45873.1};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G869_9FIRM
Displaying 16 items

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