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L2_039_000M1_scaffold_990

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_990_1
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38..751)
DNA (714bp) protein (238aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1Y7_9CLOT
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EEG74151.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L2_039_000M1_scaffold_990_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(751..2097)
DNA (1347bp) protein (449aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGG3_CLOSV
L2_039_000M1_scaffold_990_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2192..3148)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30838.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_990_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3289..3981)
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Dorea sp. 5-2 RepID=R9N766_9FIRM
L2_039_000M1_scaffold_990_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4386..4628
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGG0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30840.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_990_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4890..5357)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGF9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06313.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_990_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5432..6346)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGF8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06312.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_039_000M1_scaffold_990_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6479..7543
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=Clostridiales RepID=B0NGF7_CLOSV
L2_039_000M1_scaffold_990_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7602..8162)
DNA (561bp) protein (187aa)
Sigma-70 region 2 n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGF6_CLOSV
Sigma-70 region 2 {ECO:0000313|EMBL:EDS06310.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
RNA polymerase sigma factor, sigma-70 family
L2_039_000M1_scaffold_990_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8214..8624)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06905.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L2_039_000M1_scaffold_990_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8723..9490
DNA (768bp) protein (256aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPM8_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_039_000M1_scaffold_990_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9434..10045)
DNA (612bp) protein (204aa)
Peptidase, S54 family n=2 Tax=Clostridiales RepID=B0NGF3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30847.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L2_039_000M1_scaffold_990_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10245..10994)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGF1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06305.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_039_000M1_scaffold_990_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10997..11416)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D727_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75993.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L2_039_000M1_scaffold_990_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11453..11884)
DNA (432bp) protein (144aa)
Peptidase, A24 family n=2 Tax=Clostridiales RepID=B0NGE9_CLOSV
Peptidase, A24 family {ECO:0000313|EMBL:EDS06303.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
peptidase A24A prepilin type IV
L2_039_000M1_scaffold_990_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11872..12684)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30852.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_990_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12768..14144)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGE7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30853.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_990_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14146..14340)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BFF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63740.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_039_000M1_scaffold_990_19
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14395..14868)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NGS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79207.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
Displaying 19 items

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