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L2_039_000M1_scaffold_1152

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_1152_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..589
DNA (588bp) protein (196aa)
Cohesin domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWP4_9CLOT
Cohesin domain protein {ECO:0000313|EMBL:EDO60191.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
CHAP domain./Bacterial SH3 domain./Fibronectin type III domain.
L2_039_000M1_scaffold_1152_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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660..1919
DNA (1260bp) protein (420aa)
Putative peptidoglycan binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C339_9CLOT
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EEG73390.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Putative peptidoglycan-binding domain-containing protein
L2_039_000M1_scaffold_1152_3
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1987..3018)
DNA (1032bp) protein (344aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
RIP metalloprotease RseP n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C333_9CLOT
RIP metalloprotease RseP
L2_039_000M1_scaffold_1152_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3027..4169)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Clostridiales RepID=B0NEY9_CLOSV
L2_039_000M1_scaffold_1152_5
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4235..5041)
DNA (807bp) protein (269aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MKE6_9FIRM
L2_039_000M1_scaffold_1152_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5034..5750)
DNA (717bp) protein (239aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=3 Tax=Lachnospiraceae RepID=A7B7R2_RUMGN
L2_039_000M1_scaffold_1152_7
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5839..6390)
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Dorea sp. CAG:105 RepID=R5D4J1_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ribosome recycling factor
L2_039_000M1_scaffold_1152_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6411..7106)
DNA (696bp) protein (232aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Dorea RepID=A6BEW1_9FIRM
L2_039_000M1_scaffold_1152_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7198..8559)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=B0NEZ4_CLOSV
MATE efflux family protein {ECO:0000313|EMBL:EDS06836.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative efflux protein, MATE family
L2_039_000M1_scaffold_1152_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8706..9905)
DNA (1200bp) protein (400aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6WIZ8_9FIRM
L2_039_000M1_scaffold_1152_11
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9935..10483)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W6V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06828.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Response regulator with putative antiterminator output domain
L2_039_000M1_scaffold_1152_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10518..11813)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XKC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06827.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
glutamine synthetase, type I
L2_039_000M1_scaffold_1152_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11863..13206)
DNA (1344bp) protein (448aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Dorea sp. CAG:317 RepID=R6WS93_9FIRM
Displaying 13 items

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