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L2_039_000M1_scaffold_1287

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_1287_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..441)
DNA (441bp) protein (147aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PMV3_9CLOT
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_039_000M1_scaffold_1287_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(422..1648)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NCN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80726.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
alcohol dehydrogenase
L2_039_000M1_scaffold_1287_3
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1691..2149)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70909.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_039_000M1_scaffold_1287_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2378..2704
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75721.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L2_039_000M1_scaffold_1287_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2739..3056
DNA (318bp) protein (106aa)
Sporulation protein YqfC n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAX3_CLOSV
Sporulation protein YqfC {ECO:0000313|EMBL:EDS08281.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sporulation protein YqfC
L2_039_000M1_scaffold_1287_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3097..4356
DNA (1260bp) protein (420aa)
Sporulation protein YqfD n=1 Tax=Dorea sp. 5-2 RepID=R9NIS8_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:EOS79892.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
sporulation protein YqfD
L2_039_000M1_scaffold_1287_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4416..5405
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30321.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_039_000M1_scaffold_1287_8
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5408..5902
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Endoribonuclease YbeY n=1 Tax=Dorea sp. CAG:317 RepID=R6WGQ4_9FIRM
conserved hypothetical protein TIGR00043
L2_039_000M1_scaffold_1287_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5921..7591
DNA (1671bp) protein (557aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAW9_CLOSV
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS08277.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
stage V sporulation protein B, putative
L2_039_000M1_scaffold_1287_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7648..8067
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAW8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30318.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_039_000M1_scaffold_1287_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8159..8380
DNA (222bp) protein (74aa)
UPF0291 protein DORLON_00566 n=2 Tax=Dorea RepID=A6BE50_9FIRM
UPF0291 protein DORLON_00566 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_039_000M1_scaffold_1287_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8328..9086
DNA (759bp) protein (253aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQI1_9FIRM
L2_039_000M1_scaffold_1287_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9052..10497
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQH9_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_039_000M1_scaffold_1287_14
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10575..11000
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79903.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Predicted membrane protein
L2_039_000M1_scaffold_1287_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11060..12040
DNA (981bp) protein (327aa)
DNA mismatch repair protein MutS n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQH7_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA mismatch repair protein MutS
Displaying 15 items

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