ggKbase home page

L2_039_000M1_scaffold_1629

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_1629_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1689
DNA (1689bp) protein (563aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSU5_9FIRM
L2_039_000M1_scaffold_1629_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1729..2838
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=1 Tax=Dorea sp. CAG:317 RepID=R6W649_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
RNA polymerase, sigma 70 subunit, RpoD
L2_039_000M1_scaffold_1629_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2852..3577
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NBC6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08434.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted SAM-dependent methyltransferase
L2_039_000M1_scaffold_1629_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3555..4331
DNA (777bp) protein (259aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Dorea sp. CAG:317 RepID=R6WRG4_9FIRM
conserved hypothetical protein TIGR00486
L2_039_000M1_scaffold_1629_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4395..6083
DNA (1689bp) protein (563aa)
Uridine kinase (EC:2.7.1.48)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WAZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06525.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_039_000M1_scaffold_1629_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6215..7312)
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Clostridiales RepID=F7KST6_9FIRM
L2_039_000M1_scaffold_1629_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7518..9170
DNA (1653bp) protein (551aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBB8_CLOSV
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDS08426.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L2_039_000M1_scaffold_1629_8
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9191..10003
DNA (813bp) protein (271aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Lachnospiraceae RepID=F7JJ26_9FIRM
Displaying 8 items

View Taxonomy