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L2_039_000M1_scaffold_2024

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_2024_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..648)
DNA (648bp) protein (216aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Dorea sp. CAG:317 RepID=R6WL33_9FIRM
L2_039_000M1_scaffold_2024_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(751..1764)
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W981_9FIRM
L2_039_000M1_scaffold_2024_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1907..2707)
DNA (801bp) protein (267aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XMS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07617.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_039_000M1_scaffold_2024_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2709..3794)
DNA (1086bp) protein (362aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Dorea RepID=R7G1A9_9FIRM
L2_039_000M1_scaffold_2024_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3809..4249)
DNA (441bp) protein (147aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=2 Tax=Clostridium RepID=B6FS86_9CLOT
Fe-S iron-sulfur cluster assembly protein, NifU family {ECO:0000313|EMBL:EEA81156.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L2_039_000M1_scaffold_2024_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4325..5509)
DNA (1185bp) protein (395aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=2 Tax=Clostridium RepID=B6FS87_9CLOT
L2_039_000M1_scaffold_2024_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5576..6034)
DNA (459bp) protein (153aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridiales RepID=B0ND71_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30565.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
transcriptional regulator, BadM/Rrf2 family
L2_039_000M1_scaffold_2024_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6177..7502
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30564.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_039_000M1_scaffold_2024_9
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7573..8112)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NEL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81750.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Displaying 9 items

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