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L2_039_000M1_scaffold_2417

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_2417_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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205..1416
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86102.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
regulator
L2_039_000M1_scaffold_2417_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1468..2127)
DNA (660bp) protein (220aa)
Thiamine diphosphokinase {ECO:0000313|EMBL:EDS06068.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EDS06068.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=2 Tax=Clostridiales RepID=B0NH58_CLOSV
L2_039_000M1_scaffold_2417_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2120..2782)
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G821_9FIRM
L2_039_000M1_scaffold_2417_4
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2784..3677)
DNA (894bp) protein (298aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH56_CLOSV
L2_039_000M1_scaffold_2417_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3708..5777)
DNA (2070bp) protein (690aa)
PASTA domain./Protein kinase domain. (EC:2.7.11.1)
Kinase domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH55_CLOSV
Kinase domain protein {ECO:0000313|EMBL:EDS06065.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_039_000M1_scaffold_2417_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5771..6514)
DNA (744bp) protein (248aa)
Serine/threonine phosphatase stp {ECO:0000313|EMBL:EDS06064.1}; EC=3.1.3.16 {ECO:0000313|EMBL:EDS06064.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine phosphatase stp n=2 Tax=Clostridiales RepID=B0NH54_CLOSV
L2_039_000M1_scaffold_2417_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6492..7031)
DNA (540bp) protein (180aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJM6_9FIRM
Displaying 7 items

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