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L2_039_045G1_scaffold_92

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_045G1_scaffold_92_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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326..1342
DNA (1017bp) protein (339aa)
ABC transporter, substrate-binding lipoprotein n=3 Tax=Clostridium butyricum RepID=B1QYW2_CLOBU
ABC transporter, substrate-binding lipoprotein {ECO:0000313|EMBL:EEP53474.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_039_045G1_scaffold_92_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1342..2256
DNA (915bp) protein (305aa)
ABC transporter integral membrane protein n=3 Tax=Clostridium butyricum RepID=B1QYW1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83051.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type uncharacterized transport system, permease component
L2_039_045G1_scaffold_92_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2222..3022
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KCY5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35921.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter
L2_039_045G1_scaffold_92_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3492..4733
DNA (1242bp) protein (414aa)
AAA ATPase central domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J925_CLOBU
ATPase, AAA family {ECO:0000313|EMBL:KJZ94737.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
recombination factor protein RarA
L2_039_045G1_scaffold_92_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4970..5422
DNA (453bp) protein (151aa)
Rrf2 family protein n=3 Tax=Clostridium butyricum RepID=B1QYU4_CLOBU
Iron-sulfur cluster regulator IscR {ECO:0000313|EMBL:KJZ83117.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
BadM/Rrf2 family transcriptional regulator
L2_039_045G1_scaffold_92_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5427..6608
DNA (1182bp) protein (394aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Cysteine desulfurase n=4 Tax=Clostridium butyricum RepID=B1QYU3_CLOBU
class V aminotransferase
L2_039_045G1_scaffold_92_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6610..7044
DNA (435bp) protein (145aa)
FeS cluster assembly scaffold protein NifU n=2 Tax=Clostridium butyricum RepID=M8K4P7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83112.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nifU; FeS cluster assembly scaffold protein NifU
L2_039_045G1_scaffold_92_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7050..8132
DNA (1083bp) protein (361aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=3 Tax=Clostridium butyricum RepID=B1QYU1_CLOBU
L2_039_045G1_scaffold_92_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8273..8773
DNA (501bp) protein (167aa)
PRC-barrel domain protein n=2 Tax=Clostridium butyricum RepID=M8J921_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35927.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_039_045G1_scaffold_92_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8754..9782
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHT2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83076.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
permease
L2_039_045G1_scaffold_92_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10238..12877
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
alaS; alanine--tRNA ligase AlaS (EC:6.1.1.7)
Alanine--tRNA ligase n=2 Tax=Clostridium butyricum RepID=B1QYT8_CLOBU
L2_039_045G1_scaffold_92_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13017..13274
DNA (258bp) protein (86aa)
UPF0297 protein CBY_2615 n=4 Tax=Clostridium butyricum RepID=B1QYT7_CLOBU
UPF0297 protein ClosIBUN125C_CONTIG9g00619 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_039_045G1_scaffold_92_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13322..13744
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Putative Holliday junction resolvase n=4 Tax=Clostridium butyricum RepID=B1QYT6_CLOBU
Holliday junction resolvase-like protein
L2_039_045G1_scaffold_92_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13894..14172
DNA (279bp) protein (93aa)
UPF0473 protein CBY_2613 n=4 Tax=Clostridium butyricum RepID=B1QYT5_CLOBU
UPF0473 protein HMPREF1084_00515 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_039_045G1_scaffold_92_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14233..14697
DNA (465bp) protein (155aa)
Transcriptional regulator, Fur family n=3 Tax=Clostridium butyricum RepID=B1QYT4_CLOBU
Ferric uptake regulation protein FUR {ECO:0000313|EMBL:KJZ83106.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fur; ferric uptake regulation protein Fur
L2_039_045G1_scaffold_92_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14761..16428
DNA (1668bp) protein (556aa)
rnjA1; ribonuclease J 1 (EC:3.1.-.-)
Beta-lactamase domain protein n=2 Tax=Clostridium butyricum RepID=M8JI24_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83044.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_039_045G1_scaffold_92_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16749..18575
DNA (1827bp) protein (609aa)
GTP-binding protein TypA/BipA n=2 Tax=Clostridium butyricum RepID=M8K4N5_CLOBU
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:ENZ35935.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
typA; GTP-binding protein TypA/BipA
L2_039_045G1_scaffold_92_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18668..19693
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7S4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35936.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
aminodeoxychorismate lyase
L2_039_045G1_scaffold_92_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19711..20355
DNA (645bp) protein (215aa)
yrrM; putative O-methyltransferase YrrM (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AV75_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35937.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_039_045G1_scaffold_92_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20364..21602
DNA (1239bp) protein (413aa)
Collagenase n=3 Tax=Clostridium butyricum RepID=B1QYS9_CLOBU
Peptidase, U32 family large subunit C1 {ECO:0000313|EMBL:KJZ88098.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
peptidase U32
L2_039_045G1_scaffold_92_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21713..23329
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AT46_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35939.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cell division protein FtsI/penicillin-binding protein 2
L2_039_045G1_scaffold_92_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23402..24100
DNA (699bp) protein (233aa)
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QYS7_CLOBU
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sigK; RNA polymerase sigma-28 factor SigK
L2_039_045G1_scaffold_92_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24271..25302
DNA (1032bp) protein (344aa)
Twitching mobility protein n=2 Tax=Clostridium butyricum RepID=M8KCW2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83083.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pilT; twitching mobility protein PilT
L2_039_045G1_scaffold_92_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25540..26805
DNA (1266bp) protein (422aa)
Cell division protein FtsA n=2 Tax=Clostridium butyricum RepID=M8J904_CLOBU
Cell division protein FtsA {ECO:0000313|EMBL:ENZ35942.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
actin-like ATPase involved in cell division
L2_039_045G1_scaffold_92_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26820..27953
DNA (1134bp) protein (378aa)
Cell division protein FtsZ n=4 Tax=Clostridium butyricum RepID=B1QYS4_CLOBU
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ftsZ; cell division protein FtsZ
L2_039_045G1_scaffold_92_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28424..29227
DNA (804bp) protein (268aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AT50_CLOBU
peptidase U4, sporulation factor SpoIIGA
L2_039_045G1_scaffold_92_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29190..29948
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=5 Tax=Clostridium butyricum RepID=B1QYS2_CLOBU
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sporulation sigma factor SigE
L2_039_045G1_scaffold_92_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30031..30804
DNA (774bp) protein (258aa)
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QYS1_CLOBU
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
sigG; RNA polymerase sigma-G factor SigG
L2_039_045G1_scaffold_92_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30937..31194
DNA (258bp) protein (86aa)
YlmC/YmxH family sporulation protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AV85_CLOBU
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:ENZ35947.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sporulation protein, YlmC/YmxH family
L2_039_045G1_scaffold_92_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31267..31716
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=4 Tax=Clostridium butyricum RepID=B1QYR9_CLOBU
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
nrdR; transcriptional repressor NrdR
Displaying items 1-30 of 55 in total

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