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L2_039_045G1_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_045G1_scaffold_114_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)
RNA polymerase sigma factor SigA n=3 Tax=Clostridium butyricum RepID=B1QWY9_CLOBU
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpoD1; RNA polymerase sigma factor RpoD
L2_039_045G1_scaffold_114_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(798..2573)
DNA (1776bp) protein (592aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dnaG; DNA primase DnaG (EC:2.7.7.-)
DNA primase n=3 Tax=Clostridium butyricum RepID=B1QWZ0_CLOBU
L2_039_045G1_scaffold_114_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2783..3808)
DNA (1026bp) protein (342aa)
Deoxynucleotide triphosphohydrolase family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH23_CLOBU
Putative integrase/recombinase {ECO:0000313|EMBL:KJZ97688.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
L2_039_045G1_scaffold_114_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4165..5211
DNA (1047bp) protein (349aa)
Spore coat protein S n=4 Tax=Clostridium butyricum RepID=B1QWZ2_CLOBU
Spore coat protein, CotS family {ECO:0000313|EMBL:KHD15713.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
spore coat protein CotS
L2_039_045G1_scaffold_114_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5432..8059)
DNA (2628bp) protein (876aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EEP55685.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EEP55685.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ppdK; pyruvate, phosphate dikinase PpdK (EC:2.7.9.1)
Pyruvate phosphate dikinase n=2 Tax=Clostridium butyricum RepID=B1QWZ3_CLOBU
L2_039_045G1_scaffold_114_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8167..8853)
DNA (687bp) protein (229aa)
UPI00016BA2A8 related cluster n=1 Tax=unknown RepID=UPI00016BA2A8
Uncharacterized protein {ECO:0000313|EMBL:KJZ87652.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ccpN; transcriptional repressor CcpN
L2_039_045G1_scaffold_114_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8990..9622)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4K2_CLOBU
N-terminal of elongation factor Ts {ECO:0000313|EMBL:KJZ87657.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ubiquitin-associated domain-containing protein
L2_039_045G1_scaffold_114_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9629..10378)
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH28_CLOBU
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
recO; DNA repair protein RecO
L2_039_045G1_scaffold_114_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10382..11272)
DNA (891bp) protein (297aa)
GTPase Era n=2 Tax=Clostridium butyricum RepID=M8J6U1_CLOBU
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
era; GTPase Era
L2_039_045G1_scaffold_114_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11638..12339)
DNA (702bp) protein (234aa)
Diacylglycerol kinase/PAP2 family protein n=4 Tax=Clostridium butyricum RepID=B1QWZ8_CLOBU
Diacylglycerol kinase {ECO:0000313|EMBL:EEP55502.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
diacylglycerol kinase/PAP2 family protein
L2_039_045G1_scaffold_114_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12424..12930)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ybeY; endoribonuclease YbeY (EC:3.1.-.-)
Endoribonuclease YbeY n=4 Tax=Clostridium butyricum RepID=B1QWZ9_CLOBU
L2_039_045G1_scaffold_114_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12927..15059)
DNA (2133bp) protein (711aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFS1_CLOBU
Membrane protein containing HD superfamily hydrolase domain, YQFF {ECO:0000313|EMBL:KJZ87625.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative domain HDIG-containing protein
L2_039_045G1_scaffold_114_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15090..16220)
DNA (1131bp) protein (377aa)
Sporulation protein YqfD n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH33_CLOBU
Stage IV sporulation protein {ECO:0000313|EMBL:KJZ87643.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yqfD; sporulation protein YqfD
L2_039_045G1_scaffold_114_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16217..16504)
DNA (288bp) protein (96aa)
Sporulation protein YqfC n=4 Tax=Clostridium butyricum RepID=B1QX02_CLOBU
Sporulation protein YqfC {ECO:0000313|EMBL:EEP55105.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
yqfC; sporulation protein YqfC
L2_039_045G1_scaffold_114_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16700..17152)
DNA (453bp) protein (151aa)
GatB/Yqey domain protein n=4 Tax=Clostridium butyricum RepID=B1QX03_CLOBU
GatB/Yqey domain protein {ECO:0000313|EMBL:EEP55215.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_039_045G1_scaffold_114_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17185..17361)
DNA (177bp) protein (59aa)
Ribosomal protein S21 n=5 Tax=Clostridium RepID=U5MND2_CLOSA
ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_039_045G1_scaffold_114_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17497..17841)
DNA (345bp) protein (115aa)
Histidine triad nucleotide-binding protein 2 n=4 Tax=Clostridium butyricum RepID=B1QX05_CLOBU
HIT family hydrolase {ECO:0000313|EMBL:KHD15725.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HIT-like protein
L2_039_045G1_scaffold_114_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18003..19403)
DNA (1401bp) protein (467aa)
mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QX06_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55097.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_039_045G1_scaffold_114_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19408..20169)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E n=2 Tax=Clostridium butyricum RepID=M8J6U8_CLOBU
L2_039_045G1_scaffold_114_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20178..21122)
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
prmA2; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium butyricum RepID=M8KAM7_CLOBU
L2_039_045G1_scaffold_114_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21295..21957)
DNA (663bp) protein (221aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Clostridium butyricum RepID=M8K2F3_CLOBU
L2_039_045G1_scaffold_114_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22330..23880)
DNA (1551bp) protein (517aa)
Ferredoxin-nitrite reductase n=2 Tax=Clostridium butyricum RepID=B1QX10_CLOBU
Nitrite/sulfite reductase 4Fe-4S domain protein {ECO:0000313|EMBL:EEP55318.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ferredoxin-nitrite reductase
L2_039_045G1_scaffold_114_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24129..24542
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QX12_CLOBU
Flagellar hook-basal body complex protein FliE {ECO:0000313|EMBL:KJZ97764.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
viral A-type inclusion protein repeat
L2_039_045G1_scaffold_114_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24659..25792)
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=3 Tax=Clostridium butyricum RepID=B1QX13_CLOBU
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
chaperone protein DnaJ
L2_039_045G1_scaffold_114_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25945..27786)
DNA (1842bp) protein (614aa)
Chaperone protein DnaK n=4 Tax=Clostridium butyricum RepID=B1QX14_CLOBU
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dnaK; chaperone protein DnaK
L2_039_045G1_scaffold_114_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27882..28487)
DNA (606bp) protein (202aa)
Protein GrpE n=4 Tax=Clostridium butyricum RepID=B1QX15_CLOBU
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
grpE; protein GrpE
L2_039_045G1_scaffold_114_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28525..29556)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=4 Tax=Clostridium butyricum RepID=B1QX16_CLOBU
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hrcA; heat-inducible transcription repressor HrcA
L2_039_045G1_scaffold_114_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29810..30937)
DNA (1128bp) protein (376aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Clostridium butyricum RepID=C4IDG5_CLOBU
Putative radical SAM family enzyme in heat shock {ECO:0000313|EMBL:KJZ82757.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L2_039_045G1_scaffold_114_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31007..32812)
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2G3_CLOBU
L2_039_045G1_scaffold_114_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33087..33425)
DNA (339bp) protein (113aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QX19_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87682.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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