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L2_039_045G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_045G1_scaffold_116_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..921)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D0_CLOBU
Band 7 protein {ECO:0000313|EMBL:KHD14177.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flotillin
L2_039_045G1_scaffold_116_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1235..1333
DNA (99bp) protein (33aa)
Chaperone ClpB n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFW1_CLOBU
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
clpB2; chaperone protein ClpB
L2_039_045G1_scaffold_116_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1357..3882
DNA (2526bp) protein (842aa)
UPI0003D69A8A related cluster n=1 Tax=unknown RepID=UPI0003D69A8A
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
clpB2; chaperone protein ClpB
L2_039_045G1_scaffold_116_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4084..5079
DNA (996bp) protein (332aa)
dhaK; dihydroxyacetone kinase subunit DhaK (EC:2.7.1.-)
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTT7_CLOBU
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:ENZ31016.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_039_045G1_scaffold_116_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5117..5743
DNA (627bp) protein (209aa)
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:EEP55505.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP55505.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dihydroxyacetone kinase subunit DhaL (EC:2.7.1.-)
Dihydroxyacetone kinase, L subunit n=3 Tax=Clostridium butyricum RepID=B1QXH1_CLOBU
L2_039_045G1_scaffold_116_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5764..6153
DNA (390bp) protein (130aa)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADY5_CLOBU
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:ENZ31014.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system mannnose-specific transporter subunit IIA
L2_039_045G1_scaffold_116_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6481..8220
DNA (1740bp) protein (580aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3C6_CLOBU
L2_039_045G1_scaffold_116_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8237..10303
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=3 Tax=Clostridium butyricum RepID=B1QXG8_CLOBU
L2_039_045G1_scaffold_116_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10321..10926
DNA (606bp) protein (202aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTT3_CLOBU
L2_039_045G1_scaffold_116_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10948..11823
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YU78_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31010.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_039_045G1_scaffold_116_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11928..14618
DNA (2691bp) protein (897aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sensor protein KdpD (EC:2.7.13.3)
Sensor protein KdpD n=3 Tax=Clostridium butyricum RepID=B1QXG5_CLOBU
L2_039_045G1_scaffold_116_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14611..15330
DNA (720bp) protein (240aa)
Two-component system KDP operon response regulator KdpE n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3C0_CLOBU
Two-component system KDP operon response regulator KdpE {ECO:0000313|EMBL:ENZ31008.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
KDP operon transcriptional regulatory protein KdpE
L2_039_045G1_scaffold_116_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15391..15579)
DNA (189bp) protein (63aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QXG3_CLOBU
Small acid-soluble spore protein, beta-type SASP {ECO:0000313|EMBL:KJZ87539.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_039_045G1_scaffold_116_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15862..16461)
DNA (600bp) protein (200aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=B1QXG2_CLOBU
Membrane protein {ECO:0000313|EMBL:EEP55675.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_039_045G1_scaffold_116_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16549..16764)
DNA (216bp) protein (72aa)
PspC domain protein n=4 Tax=Clostridium butyricum RepID=B1QXG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87537.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phage-shock protein
L2_039_045G1_scaffold_116_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17039..17905
DNA (867bp) protein (289aa)
PP-loop family protein n=4 Tax=Clostridium butyricum RepID=B1QXG0_CLOBU
Restriction endonuclease EcoEI subunit S {ECO:0000313|EMBL:KHD15871.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ttcA1; tRNA 2-thiocytidine biosynthesis protein TtcA
L2_039_045G1_scaffold_116_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18103..18291
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXF9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31003.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF4250
L2_039_045G1_scaffold_116_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18326..18421
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31002.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_039_045G1_scaffold_116_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18449..19780
DNA (1332bp) protein (444aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTS1_CLOBU
Diguanylate cyclase {ECO:0000313|EMBL:KHD13632.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
diguanylate cyclase (GGDEF) domain-containing protein
L2_039_045G1_scaffold_116_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20286..20831
DNA (546bp) protein (182aa)
Tryptophan transport protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2S4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97594.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_039_045G1_scaffold_116_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20907..21635)
DNA (729bp) protein (243aa)
UPI0003D5D353 related cluster n=1 Tax=unknown RepID=UPI0003D5D353
Polysaccharide deacetylase {ECO:0000313|EMBL:KHD13630.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
polysaccharide deacetylase
L2_039_045G1_scaffold_116_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21913..23175
DNA (1263bp) protein (421aa)
UPI0003D5C582 related cluster n=1 Tax=unknown RepID=UPI0003D5C582
Uracil permease {ECO:0000313|EMBL:ETI89183.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
uracil permease
L2_039_045G1_scaffold_116_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23353..28629
DNA (5277bp) protein (1759aa)
Diguanylate cyclase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH4_CLOBU
FHA domain/GGDEF domain protein {ECO:0000313|EMBL:KJZ87469.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase
L2_039_045G1_scaffold_116_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28731..29276
DNA (546bp) protein (182aa)
Cna protein B-type domain n=4 Tax=Clostridium butyricum RepID=B1QXF2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87511.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cna B domain protein
L2_039_045G1_scaffold_116_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29484..29921
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Clostridium butyricum RepID=M8K2S0_CLOBU
L2_039_045G1_scaffold_116_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30047..31972)
DNA (1926bp) protein (642aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QXF0_CLOBU
ATPase components of ABC transporter {ECO:0000313|EMBL:KJZ87532.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ydiF4; ABC transporter ATP-binding protein YdiF
L2_039_045G1_scaffold_116_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32376..32966
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=3 Tax=Clostridium butyricum RepID=C4IDU9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87463.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator
L2_039_045G1_scaffold_116_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33047..33682)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YU55_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87596.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_039_045G1_scaffold_116_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33691..34158)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADV6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87599.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_039_045G1_scaffold_116_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34300..35610
DNA (1311bp) protein (437aa)
csd1; cysteine desulfurase Csd (EC:2.8.1.7)
Aminotransferase n=4 Tax=Clostridium butyricum RepID=B1QXE6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30988.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying items 1-30 of 40 in total

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