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L2_039_045G1_scaffold_179

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_045G1_scaffold_179_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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619..1863
DNA (1245bp) protein (415aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metK; S-adenosylmethionine synthase MetK (EC:2.5.1.6)
S-adenosylmethionine synthase n=4 Tax=Clostridium butyricum RepID=M8JH07_CLOBU
L2_039_045G1_scaffold_179_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2127..4424
DNA (2298bp) protein (766aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=2 Tax=Clostridium butyricum RepID=M8JFP9_CLOBU
L2_039_045G1_scaffold_179_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4440..5456
DNA (1017bp) protein (339aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2K7_CLOBU
ComF operon protein A, DNA transporter ATPase {ECO:0000313|EMBL:KJZ84454.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
superfamily II DNA/RNA helicase required for DNA uptake
L2_039_045G1_scaffold_179_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5429..6094
DNA (666bp) protein (222aa)
ComF family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUV2_CLOBU
ComF family protein {ECO:0000313|EMBL:ENZ31200.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ComF protein
L2_039_045G1_scaffold_179_5
unknown

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6276..6377
DNA (102bp) protein (34aa)

This feature has no annotations

L2_039_045G1_scaffold_179_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6444..6977
DNA (534bp) protein (178aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEL5_CLOBU
Ribosomal subunit interface protein {ECO:0000313|EMBL:ENZ31199.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ribosome-associated factor Y
L2_039_045G1_scaffold_179_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7322..10030
DNA (2709bp) protein (903aa)
Protein translocase subunit SecA n=2 Tax=Clostridium butyricum RepID=M8JH02_CLOBU
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
secA; preprotein translocase subunit SecA
L2_039_045G1_scaffold_179_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10344..11387
DNA (1044bp) protein (348aa)
Peptide chain release factor 2 n=2 Tax=Clostridium butyricum RepID=M8JFP5_CLOBU
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
prfB; peptide chain release factor 2
L2_039_045G1_scaffold_179_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11447..12835)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUF8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31196.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
aminopeptidase
L2_039_045G1_scaffold_179_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13035..13367)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AEL1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96843.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_039_045G1_scaffold_179_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13577..14272
DNA (696bp) protein (232aa)
Regulatory protein VanR n=2 Tax=Clostridium butyricum RepID=M8JHZ8_CLOBU
DNA-binding response regulator {ECO:0000313|EMBL:KJZ84455.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gtcR; response regulator GtcR
L2_039_045G1_scaffold_179_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14262..15758
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGG3_CLOBU
integral membrane sensor signal transduction histidine kinase
L2_039_045G1_scaffold_179_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15879..16784
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUF3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31191.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
CAAX amino terminal protease family
L2_039_045G1_scaffold_179_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16979..19150
DNA (2172bp) protein (724aa)
Tex domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBF2_CLOBU
Transcription accessory protein (S1 RNA-binding domain) {ECO:0000313|EMBL:KJZ93981.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Tex-like protein
L2_039_045G1_scaffold_179_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19238..20158
DNA (921bp) protein (307aa)
Exported membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7K1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84447.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DMT superfamily permease
L2_039_045G1_scaffold_179_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20607..21182
DNA (576bp) protein (192aa)
Riboflavin transporter n=4 Tax=Clostridium butyricum RepID=B1R163_CLOBU
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
riboflavin transporter
L2_039_045G1_scaffold_179_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21250..21693)
DNA (444bp) protein (148aa)
Ribosomal-protein-S18p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ84413.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJZ84413.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGG7_CLOBU
L2_039_045G1_scaffold_179_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21677..22411)
DNA (735bp) protein (245aa)
Glycoprotease family protein n=4 Tax=Clostridium butyricum RepID=B1R165_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96840.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ
L2_039_045G1_scaffold_179_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22408..22869)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R166_CLOBU
YjeE family ATPase {ECO:0000313|EMBL:ENZ31185.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ydiB; UPF0079 ATP-binding protein YdiB
L2_039_045G1_scaffold_179_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23147..24115
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEK1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96865.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
periplasmic solute binding protein
Displaying 20 items

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