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L2_039_061G1_scaffold_39

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Displaying items 1-30 of 150 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_061G1_scaffold_39_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(596..1078)
DNA (483bp) protein (161aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Phosphoesterase, MJ0936 family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWC6_9CLOT
phosphodiesterase
L2_039_061G1_scaffold_39_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1092..1703)
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1Q2_CLOBU
rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
L2_039_061G1_scaffold_39_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1705..2454)
DNA (750bp) protein (250aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ribonuclease PH n=2 Tax=Clostridium botulinum B RepID=RNPH_CLOBB
L2_039_061G1_scaffold_39_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2472..3449)
DNA (978bp) protein (326aa)
Hydrogenase maturation factor n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8B9_9CLOT
Hydrogenase maturation factor {ECO:0000313|EMBL:EKQ51834.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
AIR synthase-like protein
L2_039_061G1_scaffold_39_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3541..5061
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS37_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55574.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_039_061G1_scaffold_39_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5071..6567)
DNA (1497bp) protein (499aa)
Putative extracellular solute-binding protein n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TJ02_CLOBB
extracellular solute-binding protein
Putative extracellular solute-binding protein {ECO:0000313|EMBL:ACD21762.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_039_061G1_scaffold_39_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6710..7021
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0A5_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84103.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_039_061G1_scaffold_39_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7159..7428)
DNA (270bp) protein (90aa)
Membrane protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSL1_CLOPA
Membrane protein {ECO:0000313|EMBL:ETD67289.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_039_061G1_scaffold_39_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7430..9421)
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ligA; DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC55_9CLOT
L2_039_061G1_scaffold_39_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9442..11691)
DNA (2250bp) protein (750aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8B7_9CLOT
L2_039_061G1_scaffold_39_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11767..12444)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27550.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_039_061G1_scaffold_39_12
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12585..13028
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D5F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI91553.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
putative lipoprotein
L2_039_061G1_scaffold_39_13
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13097..13771
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGK83838.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
L2_039_061G1_scaffold_39_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13838..15499
DNA (1662bp) protein (554aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=4 Tax=Clostridium perfringens RepID=SYQ_CLOP1
L2_039_061G1_scaffold_39_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15507..15899
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8U0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99325.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_039_061G1_scaffold_39_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15942..17597)
DNA (1656bp) protein (552aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Glutamate--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FB28_9CLOT
glutamyl-tRNA synthetase
L2_039_061G1_scaffold_39_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18285..19001)
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rluB1; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.19)
UPI0003D5BA4A related cluster n=1 Tax=unknown RepID=UPI0003D5BA4A
L2_039_061G1_scaffold_39_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19192..19881)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00622.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
lytic murein transglycosylase
L2_039_061G1_scaffold_39_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19892..21895)
DNA (2004bp) protein (668aa)
Putative Two component regulator three Y motif protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWG3_9CLOT
Putative Two component regulator three Y motif protein {ECO:0000313|EMBL:CDG00551.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Y Y Y domain protein
L2_039_061G1_scaffold_39_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22034..22519)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FT16_CLOPA
UPF0178 protein LF65_00377 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_039_061G1_scaffold_39_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22482..23831)
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Clostridium butyricum RepID=B1R095_CLOBU
L2_039_061G1_scaffold_39_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24124..25416)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96581.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative membrane protein
L2_039_061G1_scaffold_39_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25525..27066)
DNA (1542bp) protein (514aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKX0_CLOSA
L2_039_061G1_scaffold_39_24
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27130..28584)
DNA (1455bp) protein (485aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
guaB; inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9XXK4_9CLOT
L2_039_061G1_scaffold_39_25
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28931..30025)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00631.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_039_061G1_scaffold_39_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30036..30581)
DNA (546bp) protein (182aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70981.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_039_061G1_scaffold_39_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30599..31090)
DNA (492bp) protein (164aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XLS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70982.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_039_061G1_scaffold_39_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31124..31729)
DNA (606bp) protein (202aa)
Fimbrial assembly protein PilO n=1 Tax=Clostridium intestinale URNW RepID=U2NTQ9_9CLOT
pilus assembly , PilO family protein
Pilus assembly, PilO family protein {ECO:0000313|EMBL:AIY84089.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_039_061G1_scaffold_39_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31713..32276)
DNA (564bp) protein (188aa)
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:AIY84750.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_039_061G1_scaffold_39_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32278..33285)
DNA (1008bp) protein (336aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium colicanis 209318 RepID=N9WCA8_9CLOT
type IV pilus assembly PilM, family protein
Type IV pilus assembly PilM, family protein {ECO:0000313|EMBL:AIY84827.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 150 in total

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