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L2_039_121G1_scaffold_1426

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_1426_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(56..244)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70477.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_121G1_scaffold_1426_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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364..1005
DNA (642bp) protein (214aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NAD(P)H-hydrate epimerase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT82_9FIRM
yjeF N-terminal region
L2_039_121G1_scaffold_1426_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1105..2526
DNA (1422bp) protein (474aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT81_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHL70475.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
MATE efflux family protein
L2_039_121G1_scaffold_1426_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2769..3185)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70474.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Protein of unknown function (DUF2992).
L2_039_121G1_scaffold_1426_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3347..4144)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT79_9FIRM
AraC family transcriptional regulator {ECO:0000313|EMBL:KJF38384.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative bacterial transcription activator
L2_039_121G1_scaffold_1426_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4424..5749)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT78_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHL70472.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
MATE efflux family protein
L2_039_121G1_scaffold_1426_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5938..6975)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT77_9FIRM
NAD-dependent dehydratase {ECO:0000313|EMBL:KJF38386.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
mRNA-binding protein
L2_039_121G1_scaffold_1426_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7375..8928)
DNA (1554bp) protein (518aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9D7_CLOSV
Recombinase {ECO:0000313|EMBL:KJF38387.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_039_121G1_scaffold_1426_9
unknown

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comp(8960..9097)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_039_121G1_scaffold_1426_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9296..9766)
DNA (471bp) protein (157aa)
Endoribonuclease L-PSP n=2 Tax=Clostridium RepID=D3AA54_9CLOT
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJF38388.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
endoribonuclease L-PSP
L2_039_121G1_scaffold_1426_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9772..10215)
DNA (444bp) protein (148aa)
N-acyl-D-aspartate deacylase (EC:3.5.1.83)
Amidohydrolase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AA53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF38390.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_039_121G1_scaffold_1426_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10197..10325)
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70488.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Displaying 12 items

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