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L2_039_121G1_scaffold_23

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Displaying items 1-30 of 192 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_23_1
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254..2050
DNA (1797bp) protein (599aa)
Transposase, IS4 family n=3 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y8J4_9BURK
Transposase, IS4 family {ECO:0000313|EMBL:EFL82007.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
transposase
L2_039_121G1_scaffold_23_2
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(2106..2486)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0L9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42274.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
transcriptional regulator
L2_039_121G1_scaffold_23_3
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2488..3582)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=2 Tax=Burkholderiales RepID=D9Y2Z4_9BURK
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
ychF; GTP-binding protein
L2_039_121G1_scaffold_23_4
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4043)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Parasutterella RepID=R5EG66_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX87772.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L2_039_121G1_scaffold_23_5
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4018..4623)
DNA (606bp) protein (202aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Peptidyl-tRNA hydrolase n=3 Tax=Burkholderiales RepID=D9Y2Z2_9BURK
peptidyl-tRNA hydrolase
L2_039_121G1_scaffold_23_6
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4620..6380)
DNA (1761bp) protein (587aa)
Cold-shock DEAD-box protein A n=2 Tax=Parasutterella RepID=F3QHJ3_9BURK
Cold-shock DEAD-box protein A {ECO:0000313|EMBL:CCX87770.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
ATP-independent RNA helicase
L2_039_121G1_scaffold_23_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6488..7141)
DNA (654bp) protein (218aa)
50S ribosomal protein L25 n=3 Tax=Burkholderiales RepID=D9Y2Z0_9BURK
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
50S ribosomal protein L25
L2_039_121G1_scaffold_23_8
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7197..8156)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Ribose-phosphate pyrophosphokinase n=4 Tax=Proteobacteria RepID=F3QHJ1_9BURK
ribose-phosphate pyrophosphokinase
L2_039_121G1_scaffold_23_9
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8315..9166)
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Burkholderiales RepID=D9Y2Y8_9BURK
L2_039_121G1_scaffold_23_10
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9163..9666)
DNA (504bp) protein (168aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y2Y7_9BURK
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_039_121G1_scaffold_23_11
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9653..11455)
DNA (1803bp) protein (601aa)
Tetratricopeptide repeat protein n=2 Tax=Parasutterella RepID=F3QHI8_9BURK
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CCX87765.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L2_039_121G1_scaffold_23_12
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11598..12890)
DNA (1293bp) protein (431aa)
Peptidase dimerization domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2Y5_9BURK
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFL84146.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Glutamate carboxypeptidase
L2_039_121G1_scaffold_23_13
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13135..13698
DNA (564bp) protein (188aa)
Peroxiredoxin {ECO:0000313|EMBL:EFL84145.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFL84145.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=2 Tax=Burkholderiales RepID=D9Y2Y4_9BURK
L2_039_121G1_scaffold_23_14
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13767..14288)
DNA (522bp) protein (174aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y2Y3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX87437.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_039_121G1_scaffold_23_15
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14293..15393)
DNA (1101bp) protein (367aa)
General L-amino acid transport system permease protein AapM n=2 Tax=Burkholderiales RepID=D9Y2Y2_9BURK
General L-amino acid transport system permease protein AapM {ECO:0000313|EMBL:EFL84143.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
amino acid ABC transporter permease
L2_039_121G1_scaffold_23_16
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15390..16550)
DNA (1161bp) protein (387aa)
Putative general L-amino acid transport system permease protein AapQ n=3 Tax=Burkholderiales RepID=D9Y2Y1_9BURK
Putative general L-amino acid transport system permease protein AapQ {ECO:0000313|EMBL:EFL84142.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
amino acid ABC transporter permease
L2_039_121G1_scaffold_23_17
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16644..17666)
DNA (1023bp) protein (341aa)
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QHI2_9BURK
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:EGG57300.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
family 3 extracellular solute-binding protein
L2_039_121G1_scaffold_23_18
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17860..18795
DNA (936bp) protein (312aa)
Putative curved DNA-binding protein n=2 Tax=Parasutterella RepID=F3QHI1_9BURK
Putative curved DNA-binding protein {ECO:0000313|EMBL:CCX87431.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
chaperone DnaJ domain-containing protein
L2_039_121G1_scaffold_23_19
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18806..19111
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y2X8_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX87429.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_039_121G1_scaffold_23_20
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19184..20560
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y2X7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL84138.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
membrane protein
L2_039_121G1_scaffold_23_21
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20619..23144)
DNA (2526bp) protein (842aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
topB; DNA topoisomerase III family protein (EC:5.99.1.2)
DNA topoisomerase n=3 Tax=Burkholderiales RepID=D9Y2X6_9BURK
L2_039_121G1_scaffold_23_22
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23333..23860
DNA (528bp) protein (176aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=3 Tax=Burkholderiales RepID=D9Y2X5_9BURK
L2_039_121G1_scaffold_23_23
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23862..24758)
DNA (897bp) protein (299aa)
Hydrolase, alpha/beta domain protein n=3 Tax=Burkholderiales RepID=D9Y2X4_9BURK
Hydrolase alpha/beta domain protein {ECO:0000313|EMBL:CCX87420.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
alpha/beta hydrolase fold protein
L2_039_121G1_scaffold_23_24
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24849..25823
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Methionyl-tRNA formyltransferase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2X3_9BURK
methionyl-tRNA formyltransferase
L2_039_121G1_scaffold_23_25
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25820..27124
DNA (1305bp) protein (435aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Ribosomal RNA small subunit methyltransferase B n=2 Tax=Burkholderiales RepID=D9Y2X2_9BURK
ribosomal RNA small subunit methyltransferase B
L2_039_121G1_scaffold_23_26
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27124..27693
DNA (570bp) protein (190aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y2X1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX87406.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
proline rich signal peptide protein
L2_039_121G1_scaffold_23_27
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27694..29946
DNA (2253bp) protein (751aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
PAS domain S-box protein n=3 Tax=Burkholderiales RepID=D9Y2X0_9BURK
two-component sensor kinase
L2_039_121G1_scaffold_23_28
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29995..30708
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=3 Tax=Burkholderiales RepID=D9Y2W9_9BURK
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX87404.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
Two component transcriptional regulator, Fis family protein
L2_039_121G1_scaffold_23_29
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30739..32151
DNA (1413bp) protein (471aa)
Potassium transporter peripheral membrane component n=3 Tax=Burkholderiales RepID=D9Y2W8_9BURK
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:CCX87402.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
trkA; potassium transporter peripheral membrane protein
L2_039_121G1_scaffold_23_30
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32153..33634
DNA (1482bp) protein (494aa)
Trk system potassium uptake protein n=2 Tax=Parasutterella RepID=F3QHG9_9BURK
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
cation transporter
Displaying items 1-30 of 192 in total

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