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L2_039_121G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_87_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)
gdhA; GdhA NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FD46_9BIFI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
L2_039_121G1_scaffold_87_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(631..1353)
DNA (723bp) protein (241aa)
FCD domain protein n=3 Tax=Bifidobacterium RepID=A7A3M3_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30102.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative transcription factor
L2_039_121G1_scaffold_87_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1524..2036
DNA (513bp) protein (171aa)
Shikimate kinase n=2 Tax=Bifidobacterium adolescentis RepID=A7A3M2_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30103.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative gluconokinase
L2_039_121G1_scaffold_87_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2139..3467
DNA (1329bp) protein (443aa)
Gluconate permease n=2 Tax=Bifidobacterium RepID=A0ZZU6_BIFAA
Gluconate transporter {ECO:0000313|EMBL:KFI93753.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
gluconate permease
L2_039_121G1_scaffold_87_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3527..4402
DNA (876bp) protein (292aa)
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KFI93752.1}; EC=1.1.1.44 {ECO:0000313|EMBL:KFI93752.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQY3_9BIFI
putative 6-phosphogluconate dehydrogenase
L2_039_121G1_scaffold_87_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4655..5101
DNA (447bp) protein (149aa)
Large-conductance mechanosensitive channel n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENE8_BIFBS
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
large-conductance mechanosensitive channel
L2_039_121G1_scaffold_87_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5642..6352
DNA (711bp) protein (237aa)
Putative metal-dependent hydrolase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DP02_BIFLD
Metal-dependent hydrolase {ECO:0000313|EMBL:KFI93750.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
metal-dependent hydrolase
L2_039_121G1_scaffold_87_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6633..8294
DNA (1662bp) protein (554aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RC71_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30108.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter
L2_039_121G1_scaffold_87_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8438..8620)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NGU1_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30109.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ATPase AAA
L2_039_121G1_scaffold_87_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8641..9750)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DQU5_BIFLN
ATPase AAA {ECO:0000313|EMBL:KFI93748.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L2_039_121G1_scaffold_87_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10244..11299
DNA (1056bp) protein (352aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAG6_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30110.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_87_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11474..12688
DNA (1215bp) protein (405aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000313|EMBL:KFI93746.1}; EC=2.7.1.170 {ECO:0000313|EMBL:KFI93746.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Anhydro-N-acetylmuramic acid kinase n=4 Tax=Bifidobacterium dentium RepID=D2Q6X0_BIFDB
anhydro-N-acetylmuramic acid kinase
L2_039_121G1_scaffold_87_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12812..14332
DNA (1521bp) protein (507aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rbsA1; ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
Ribose transport ATP-binding protein RbsA n=2 Tax=Bifidobacterium dentium RepID=D2Q6W9_BIFDB
L2_039_121G1_scaffold_87_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14429..15439
DNA (1011bp) protein (337aa)
Ribose transport system permease protein RbsC n=4 Tax=Bifidobacterium dentium RepID=D2Q6W8_BIFDB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30113.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rbsC1; ribose transporter permease RbsC
L2_039_121G1_scaffold_87_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15642..16613
DNA (972bp) protein (324aa)
D-ribose-binding protein RbsB n=4 Tax=Bifidobacterium dentium RepID=D2Q6W7_BIFDB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30114.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rbsB1; D-ribose-binding protein RbsB
L2_039_121G1_scaffold_87_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16770..17249)
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage, Dps family protein n=7 Tax=Bifidobacterium RepID=E3ENF6_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30115.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
dps; DNA protection during starvation protein
L2_039_121G1_scaffold_87_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17401..18696)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VCE1_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30116.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_87_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18817..19887)
DNA (1071bp) protein (357aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2Z4_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30117.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_87_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20226..20933
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FB59
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30118.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_87_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21073..22104
DNA (1032bp) protein (344aa)
ABC transporter, extracellular substrate binding protein, probably Alginate uptake porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILU7_BIFAP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30119.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter, extracellular substrate binding protein, probably Alginate uptake porter
L2_039_121G1_scaffold_87_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22146..22607
DNA (462bp) protein (154aa)
ABC transporter, extracellular substrate binding protein, probably Alginate uptake porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILU7_BIFAP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30120.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter, extracellular substrate binding protein, probably Alginate uptake porter
L2_039_121G1_scaffold_87_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23041..23883
DNA (843bp) protein (281aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2Z9_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30122.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_87_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23880..24440
DNA (561bp) protein (187aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2Z9_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30123.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_87_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24483..25166)
DNA (684bp) protein (228aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
cynT; carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase n=6 Tax=Bifidobacterium RepID=I3WFG8_BIFBI
L2_039_121G1_scaffold_87_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25433..25996
DNA (564bp) protein (188aa)
Peroxiredoxin {ECO:0000313|EMBL:KFI93736.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KFI93736.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ahpC; AhpC Alkyl hydroperoxide reductase C22 protein (EC:1.11.1.15)
Alkyl hydroperoxide reductase C22 protein n=8 Tax=Bifidobacterium RepID=E3ENG1_BIFBS
L2_039_121G1_scaffold_87_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26165..28078
DNA (1914bp) protein (638aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFI93735.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KFI93735.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSJ0_BIFLS
putative thioredoxin reductase
L2_039_121G1_scaffold_87_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28177..28521)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZF50_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30127.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_87_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28521..29207)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZF50_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30128.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Putative DNA-binding protein in cluster with Type I restriction-modification system
L2_039_121G1_scaffold_87_29
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29191..29487)
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI49926.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
L2_039_121G1_scaffold_87_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29623..30903)
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=2 Tax=Bifidobacterium longum RepID=D6ZX79_BIFLJ
Major facilitator superfamily protein {ECO:0000313|EMBL:KFI93734.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative transport protein
Displaying items 1-30 of 82 in total

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