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L2_039_121G1_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_99_1
unknown

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3..74
DNA (72bp) protein (24aa)

This feature has no annotations

L2_039_121G1_scaffold_99_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(258..458)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75529.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_99_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(634..2961)
DNA (2328bp) protein (776aa)
Ferrous iron transport protein B n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z949_9ACTN
Ferrous iron transport protein B {ECO:0000313|EMBL:CDA35365.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FeoB; Fe2+ transport system
L2_039_121G1_scaffold_99_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3085..3306)
DNA (222bp) protein (74aa)
FeoA domain protein n=3 Tax=Collinsella RepID=A4E8T9_9ACTN
FeoA domain protein {ECO:0000313|EMBL:EBA40305.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
FeoA family protein
L2_039_121G1_scaffold_99_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3346..3588)
DNA (243bp) protein (81aa)
FeoA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2G8_9ACTN
FeoA domain protein {ECO:0000313|EMBL:CDA35367.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FeoA family protein
L2_039_121G1_scaffold_99_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3825..4073)
DNA (249bp) protein (83aa)
Phosphocarrier HPr family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6M7_9ACTN
Phosphocarrier HPr family {ECO:0000313|EMBL:CDA35368.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphocarrier protein HPr
L2_039_121G1_scaffold_99_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(4217..6004)
DNA (1788bp) protein (596aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EBA40308.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EBA40308.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8U2_9ACTN
L2_039_121G1_scaffold_99_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6261..6896
DNA (636bp) protein (212aa)
Phosphoserine phosphatase SerB n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z954_9ACTN
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:KGI75622.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
serB; phosphoserine phosphatase SerB
L2_039_121G1_scaffold_99_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7011..7793
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM59_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35371.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
L2_039_121G1_scaffold_99_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7804..8715
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8U5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40311.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
conserved hypothetical protein TIGR00299
L2_039_121G1_scaffold_99_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8718..9257
DNA (540bp) protein (180aa)
Transcriptional regulator, TetR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8U6_9ACTN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EBA40312.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
regulatory protein TetR
L2_039_121G1_scaffold_99_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9560..10291)
DNA (732bp) protein (244aa)
Transporter, major intrinsic protein (MIP) family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8U7_9ACTN
Transporter, major intrinsic protein (MIP) family protein {ECO:0000313|EMBL:EBA40313.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycerol transporter
L2_039_121G1_scaffold_99_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10341..11711)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8U8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40314.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_121G1_scaffold_99_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12103..14928)
DNA (2826bp) protein (942aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Phosphoenolpyruvate carboxykinase (GTP) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V0_9ACTN
phosphoenolpyruvate carboxylase
L2_039_121G1_scaffold_99_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(15174..16487)
DNA (1314bp) protein (438aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A565_9ACTN
L2_039_121G1_scaffold_99_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16792..18096)
DNA (1305bp) protein (435aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V3_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA40319.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Sugar phosphate permease
L2_039_121G1_scaffold_99_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18100..19401)
DNA (1302bp) protein (434aa)
Amidohydrolase (EC:3.5.1.47)
Amidohydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJA5_9ACTN
Amidohydrolase {ECO:0000313|EMBL:CDA36684.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_99_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19518..20501)
DNA (984bp) protein (328aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V5_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA40321.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transporter protein
L2_039_121G1_scaffold_99_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20841..23030)
DNA (2190bp) protein (730aa)
YhgE/Pip domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75657.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_99_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23031..25847)
DNA (2817bp) protein (939aa)
YhgE/Pip domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V7_9ACTN
YhgE/Pip domain protein {ECO:0000313|EMBL:EBA40323.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_121G1_scaffold_99_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26244..28268)
DNA (2025bp) protein (675aa)
Chaperone protein HtpG n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ88_9ACTN
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Heat shock protein Hsp90
L2_039_121G1_scaffold_99_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28470..28970)
DNA (501bp) protein (167aa)
Acetyltransferase GNAT family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAD5_9ACTN
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA36663.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_039_121G1_scaffold_99_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29010..29660)
DNA (651bp) protein (217aa)
PHP domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A6B7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75653.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PHP domain-containing protein
L2_039_121G1_scaffold_99_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29678..30415)
DNA (738bp) protein (246aa)
Capsular exopolysaccharide family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQM3_9ACTN
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDA36661.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
capsular polysaccharide biosynthesis protein
L2_039_121G1_scaffold_99_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30418..31074)
DNA (657bp) protein (219aa)
Chain length determinant protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCS3_9ACTN
Chain length determinant protein {ECO:0000313|EMBL:CDA36660.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
lipopolysaccharide biosynthesis protein
L2_039_121G1_scaffold_99_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31270..32694)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ83_9ACTN
L2_039_121G1_scaffold_99_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32698..33426)
DNA (729bp) protein (243aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8W5_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA40331.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_039_121G1_scaffold_99_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33491..34366)
DNA (876bp) protein (292aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A6B3_9ACTN
L2_039_121G1_scaffold_99_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34470..35708)
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8W7_9ACTN
integral membrane sensor signal transduction histidine kinase
L2_039_121G1_scaffold_99_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35735..36430)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8W8_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA40334.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
two component transcriptional regulator, winged helix family
Displaying items 1-30 of 83 in total

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