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L2_039_121G1_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_115_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56..748)
DNA (693bp) protein (231aa)
beta-phosphoglucomutase (EC:5.4.2.6)
Beta-phosphoglucomutase n=2 Tax=Clostridiales RepID=H1CAT8_9FIRM
Beta-phosphoglucomutase {ECO:0000313|EMBL:EHO34557.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_115_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(750..2750)
DNA (2001bp) protein (667aa)
glycosyl hydrolase family 31 protein (EC:3.2.1.-)
Glycosyl hydrolase, family 31 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BKW5_9CLOT
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:ERI72875.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_121G1_scaffold_115_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2755..3582)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34555.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter permease
L2_039_121G1_scaffold_115_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3572..4498)
DNA (927bp) protein (309aa)
Putative transmembrane permease MsmF n=3 Tax=Clostridiales RepID=G9YLI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34554.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter permease
L2_039_121G1_scaffold_115_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4564..5859)
DNA (1296bp) protein (432aa)
ABC transporter, solute-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56503.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
sugar ABC transporter substrate-binding protein
L2_039_121G1_scaffold_115_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5927..6970)
DNA (1044bp) protein (348aa)
Sugar-binding domain protein n=3 Tax=Clostridiales RepID=G9YLI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34552.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_115_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7156..8955
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56501.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_121G1_scaffold_115_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8945..11107
DNA (2163bp) protein (721aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34550.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
glycosyl hydrolase family 65 central catalytic domain-containing protein
L2_039_121G1_scaffold_115_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11165..11788)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34549.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
scaffolding protein
L2_039_121G1_scaffold_115_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11895..12122)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56498.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_115_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12467..13345
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BKX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56497.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_115_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13646..13828)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34546.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_115_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14587..15321)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34545.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Methyltransferase domain.
L2_039_121G1_scaffold_115_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15337..17262)
DNA (1926bp) protein (642aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B421_9CLOT
5'-nucleotidase protein {ECO:0000313|EMBL:ERI72889.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_121G1_scaffold_115_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17446..18078
DNA (633bp) protein (211aa)
Translation initiation factor IF-3 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS4_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
infC; translation initiation factor IF-3
L2_039_121G1_scaffold_115_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18121..18324
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=3 Tax=Clostridiales RepID=G9YMM8_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rpmI; 50S ribosomal protein L35
L2_039_121G1_scaffold_115_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18366..18722
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CUG0_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rplT; 50S ribosomal protein L20
L2_039_121G1_scaffold_115_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19383..20393)
DNA (1011bp) protein (337aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Clostridiales RepID=G9YMN1_9FIRM
L2_039_121G1_scaffold_115_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20460..21038)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34539.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
N-acetyltransferase GCN5
L2_039_121G1_scaffold_115_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21031..21483)
DNA (453bp) protein (151aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.-)
Ribosomal-protein-alanine acetyltransferase n=3 Tax=Clostridiales RepID=G9YMN3_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:KGF56487.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_115_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21497..21736)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34537.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_115_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21750..22334)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6T6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65002.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
GNAT family acetyltransferase
L2_039_121G1_scaffold_115_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22458..25106)
DNA (2649bp) protein (883aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAR5_9FIRM
L2_039_121G1_scaffold_115_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25323..25868)
DNA (546bp) protein (182aa)
Signal peptide protein, YSIRK family n=2 Tax=Clostridiales RepID=U2BWD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34425.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_115_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25861..26352)
DNA (492bp) protein (164aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=H1CAF5_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34424.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L2_039_121G1_scaffold_115_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26483..27790)
DNA (1308bp) protein (436aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUW0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM41522.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MATE efflux family protein
L2_039_121G1_scaffold_115_27
unknown

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28078..28623
DNA (546bp) protein (182aa)

This feature has no annotations

L2_039_121G1_scaffold_115_28
unknown

Not on your lists

28778..28918
DNA (141bp) protein (47aa)

This feature has no annotations

L2_039_121G1_scaffold_115_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28960..30369)
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Clostridiales RepID=H1CAF3_9FIRM
L2_039_121G1_scaffold_115_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30366..31097)
DNA (732bp) protein (244aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Clostridiales RepID=H1CAF2_9FIRM
Displaying items 1-30 of 91 in total

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