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L2_039_121G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_116_1
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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192..584
DNA (393bp) protein (131aa)
HTH-type transcriptional activator HxlR n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EGD2_9BURK
HTH-type transcriptional activator HxlR {ECO:0000313|EMBL:CCX87837.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
HxlR family transcriptional regulator
L2_039_121G1_scaffold_116_2
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

656..1864
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y427_9BURK
Putative membrane protein {ECO:0000313|EMBL:CCX87838.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
putative permease
L2_039_121G1_scaffold_116_3
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2055..3509
DNA (1455bp) protein (485aa)
Aspartate racemase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QMC0_9BURK
Aspartate racemase {ECO:0000313|EMBL:EGG52058.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
aspartate racemase
L2_039_121G1_scaffold_116_4
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3509..4429
DNA (921bp) protein (307aa)
oxidoreductase (EC:1.1.1.31)
Phosphogluconate dehydrogenase, NAD binding domain protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QMB9_9BURK
Phosphogluconate dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:EGG52057.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
L2_039_121G1_scaffold_116_5
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4497..5075)
DNA (579bp) protein (193aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease n=2 Tax=Parasutterella RepID=F3QMB8_9BURK
L2_039_121G1_scaffold_116_6
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5186..5707)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y423_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83719.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_039_121G1_scaffold_116_7
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5858..7123
DNA (1266bp) protein (422aa)
Peptidase, M48 family n=3 Tax=Burkholderiales RepID=D9Y422_9BURK
Peptidase M48 family {ECO:0000313|EMBL:CCX87214.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
Zn-dependent protease with chaperone function
L2_039_121G1_scaffold_116_8
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7130..8038
DNA (909bp) protein (303aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
rsgA; ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y421_9BURK
L2_039_121G1_scaffold_116_9
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8777..9295
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y420_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX87216.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L2_039_121G1_scaffold_116_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(9422..10708)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ANC1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42617.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
abgB; AbgB protein
L2_039_121G1_scaffold_116_11
Sutterella sp. CAG:351, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10999..11973
DNA (975bp) protein (325aa)
LysR substrate binding domain protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7IKA0_9BURK
LysR substrate binding domain protein {ECO:0000313|EMBL:CDE52050.1}; TaxID=1262975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:351.;"
LysR family transcriptional regulator
L2_039_121G1_scaffold_116_12
Sutterella sp. CAG:351, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12346..13734
DNA (1389bp) protein (463aa)
Transporter anaerobic C4-dicarboxylate uptake C (DcuC) family n=1 Tax=Sutterella sp. CAG:351 RepID=R7IN43_9BURK
Transporter anaerobic C4-dicarboxylate uptake C (DcuC) family {ECO:0000313|EMBL:CDE52052.1}; TaxID=1262975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:351.;"
anaerobic c4-dicarboxylate antiporter, DcuC family
L2_039_121G1_scaffold_116_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists


comp(13837..14205)
DNA (369bp) protein (123aa)
50S ribosomal protein L19 n=3 Tax=Proteobacteria RepID=D9Y419_9BURK
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
LSU ribosomal protein L19p
L2_039_121G1_scaffold_116_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(14287..15036)
DNA (750bp) protein (250aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTT3_9PROT
tRNA (guanine-N(1)-)-methyltransferase
L2_039_121G1_scaffold_116_15
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15045..15533)
DNA (489bp) protein (163aa)
Ribosome maturation factor RimM n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EJ32_9BURK
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
rimM; 16S rRNA-processing protein RimM
L2_039_121G1_scaffold_116_16
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15587..15847)
DNA (261bp) protein (87aa)
30S ribosomal protein S16 n=4 Tax=Proteobacteria RepID=D9Y416_9BURK
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
rpsP; 30S ribosomal protein S16
L2_039_121G1_scaffold_116_17
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16034..16963)
DNA (930bp) protein (310aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y415_9BURK
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EFL83711.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
electron transfer flavoprotein subunit beta
L2_039_121G1_scaffold_116_18
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16974..17726)
DNA (753bp) protein (251aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y414_9BURK
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EFL83710.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
electron transfer flavoprotein alpha/beta-subunit
L2_039_121G1_scaffold_116_19
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17914..19104)
DNA (1191bp) protein (397aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=2 Tax=Parasutterella RepID=F3QML4_9BURK
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EGG51618.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
dioxygenase
L2_039_121G1_scaffold_116_20
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19294..19704)
DNA (411bp) protein (137aa)
Inner membrane protein YqaA family protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y412_9BURK
Inner membrane protein YqaA family protein {ECO:0000313|EMBL:EFL83708.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_039_121G1_scaffold_116_21
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19762..20403
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y411_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX88016.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L2_039_121G1_scaffold_116_22
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20698..22347
DNA (1650bp) protein (550aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
fhs; Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QML7_9BURK
L2_039_121G1_scaffold_116_23
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22445..23725)
DNA (1281bp) protein (427aa)
Putative ATP synthase F0, A subunit n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y409_9BURK
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EFL83705.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_039_121G1_scaffold_116_24
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23729..24661)
DNA (933bp) protein (311aa)
Histone deacetylase family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y408_9BURK
Histone deacetylase family {ECO:0000313|EMBL:EFL83704.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hda; histone deacetylase
L2_039_121G1_scaffold_116_25
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24915..25916)
DNA (1002bp) protein (334aa)
L-asparaginase, type II {ECO:0000313|EMBL:EFL83703.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EFL83703.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L-asparaginase, type II n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y407_9BURK
L-asparaginase
L2_039_121G1_scaffold_116_26
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25939..27171)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y406_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83702.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_039_121G1_scaffold_116_27
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27229..28512)
DNA (1284bp) protein (428aa)
Citrate transporter n=2 Tax=Burkholderiales RepID=D9Y405_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX88026.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
citrate transporter
L2_039_121G1_scaffold_116_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28675..29382)
DNA (708bp) protein (236aa)
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y404_9BURK
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EFL83700.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
two-component response regulator
L2_039_121G1_scaffold_116_29
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29392..31923)
DNA (2532bp) protein (844aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
two-component sensor histidine kinase (EC:2.7.13.3)
PAS domain S-box protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y403_9BURK
L2_039_121G1_scaffold_116_30
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32169..33356
DNA (1188bp) protein (396aa)
Lytic murein transglycosylase B {ECO:0000313|EMBL:EFL83698.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFL83698.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Lytic murein transglycosylase B n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y402_9BURK
lytic murein transglycosylase B
Displaying items 1-30 of 76 in total

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