ggKbase home page

L2_039_121G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_133_1
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

506..1876
DNA (1371bp) protein (457aa)
Predicted transcriptional regulator containing an HTH domain n=1 Tax=Clostridium sp. CAG:411 RepID=R7I118_9CLOT
Predicted transcriptional regulator containing an HTH domain {ECO:0000313|EMBL:CDE45614.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
putative transcriptional regulator containing an HTH domain
L2_039_121G1_scaffold_133_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2126..2320
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D0T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI89943.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_039_121G1_scaffold_133_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2302..2454
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AIC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42342.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2676..3440
DNA (765bp) protein (255aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S5E4_9CLOT
Filamentation induced by cAMP protein fic {ECO:0000313|EMBL:ENZ41737.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_039_121G1_scaffold_133_5
unknown

Not on your lists

4000..4128
DNA (129bp) protein (43aa)

This feature has no annotations

L2_039_121G1_scaffold_133_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4484..5899
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z1Y8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42343.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5892..6560
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42344.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6557..9865
DNA (3309bp) protein (1103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z819_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42345.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9852..11126
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42346.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_039_121G1_scaffold_133_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11201..13921
DNA (2721bp) protein (907aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KT65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL10067.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Uncharacterized conserved protein (DUF2075)./Protein of unknown function (DUF2726)./Viral (Superfamily 1) RNA helicase.
L2_039_121G1_scaffold_133_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13992..14633
DNA (642bp) protein (214aa)
uppS1; di-trans-poly-cis-decaprenylcistransferase UppS (EC:2.5.1.31)
Undecaprenyl pyrophosphate synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z1Z9_9CLOT
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:CDD42353.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_133_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14667..15953)
DNA (1287bp) protein (429aa)
UPF0597 protein CLS_11190 n=3 Tax=Clostridium RepID=D6DGH9_CLOSC
hypothetical protein
UPF0597 protein BN500_00334 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_039_121G1_scaffold_133_13
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16116..17054
DNA (939bp) protein (313aa)
Transcriptional regulator n=3 Tax=Clostridium RepID=D6DGI0_CLOSC
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCY86741.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_039_121G1_scaffold_133_14
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17051..18052)
DNA (1002bp) protein (334aa)
Uroporphyrinogen-III decarboxylase n=3 Tax=Clostridium RepID=D6DGI1_CLOSC
Uroporphyrinogen-III decarboxylase
Uncharacterized protein {ECO:0000313|EMBL:EFE10904.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_039_121G1_scaffold_133_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18423..19436
DNA (1014bp) protein (338aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SIQ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95604.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_039_121G1_scaffold_133_16
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19461..19928
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09179.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L2_039_121G1_scaffold_133_17
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19944..21461
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FVU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09180.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
tripartite tricarboxylate transporter family protein
L2_039_121G1_scaffold_133_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21609..23165
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42354.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23181..24350)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42356.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24372..25796)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AIE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42357.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted membrane protein involved in D-alanine export
L2_039_121G1_scaffold_133_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25800..26363)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42359.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26487..27161)
DNA (675bp) protein (225aa)
3-Cys thioredoxin peroxidase (EC:1.11.1.15)
3-Cys thioredoxin peroxidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z837_9CLOT
3-Cys thioredoxin peroxidase {ECO:0000313|EMBL:CDD42360.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_133_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27383..28624
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z210_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42363.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
FliB family protein
L2_039_121G1_scaffold_133_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28700..31936
DNA (3237bp) protein (1079aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z843_9CLOT
L2_039_121G1_scaffold_133_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32019..32645
DNA (627bp) protein (209aa)
Maf-like protein BN593_01849 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFY9_9CLOT
Maf-like protein BN593_01849 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
MAF protein
L2_039_121G1_scaffold_133_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32642..33430
DNA (789bp) protein (263aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN07_9CLOT
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDD42371.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
HAD-superfamily hydrolase, subfamily IIB
L2_039_121G1_scaffold_133_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33465..34457
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42374.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_133_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34460..35914
DNA (1455bp) protein (485aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.52)
Beta-glucosidase-related glycosidases n=1 Tax=Clostridium sp. CAG:299 RepID=R7AIG2_9CLOT
L2_039_121G1_scaffold_133_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36099..37394)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
M18 family aminopeptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z226_9CLOT
Aspartyl aminopeptidase
L2_039_121G1_scaffold_133_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37542..38039
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42381.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
Displaying items 1-30 of 67 in total

View Taxonomy