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L2_039_121G1_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_151_1
unknown

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1..168
DNA (168bp) protein (56aa)

This feature has no annotations

L2_039_121G1_scaffold_151_2
unknown

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313..798
DNA (486bp) protein (162aa)

This feature has no annotations

L2_039_121G1_scaffold_151_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(697..1335)
DNA (639bp) protein (213aa)
SNARE-like domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP1_9ACTN
SNARE-like domain protein {ECO:0000313|EMBL:EEP44175.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L2_039_121G1_scaffold_151_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1482..3269)
DNA (1788bp) protein (596aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP2_9ACTN
Signal transduction histidine kinase
L2_039_121G1_scaffold_151_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3266..4099)
DNA (834bp) protein (278aa)
Response regulator receiver domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP3_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EEP44177.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_039_121G1_scaffold_151_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4634..5407
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBN9_9ACTN
L2_039_121G1_scaffold_151_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5428..6129)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA48_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36553.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_039_121G1_scaffold_151_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6130..7866)
DNA (1737bp) protein (579aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WI81_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75082.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
dihydropteroate synthase
L2_039_121G1_scaffold_151_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7962..8714)
DNA (753bp) protein (251aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Transcriptional regulator Sir2 family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQC9_9ACTN
Transcriptional regulator Sir2 family {ECO:0000313|EMBL:CDA36551.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_151_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8850..9668
DNA (819bp) protein (273aa)
exodeoxyribonuclease III Xth (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCH2_9ACTN
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDA36550.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_151_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10204..10917)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBP6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75079.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_151_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10922..12565)
DNA (1644bp) protein (548aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBP7_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39007.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cobalt ABC transporter ATPase
L2_039_121G1_scaffold_151_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12565..13596)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBP8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39008.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_121G1_scaffold_151_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13652..15064
DNA (1413bp) protein (471aa)
glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF68_9ACTN
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_151_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15257..16243
DNA (987bp) protein (329aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBQ1_9ACTN
L2_039_121G1_scaffold_151_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16674..17801
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00035E5E6F
Uncharacterized protein {ECO:0000313|EMBL:KGI75074.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_039_121G1_scaffold_151_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18153..18782
DNA (630bp) protein (210aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBQ2_9ACTN
L2_039_121G1_scaffold_151_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19155..19994
DNA (840bp) protein (280aa)
Ferredoxin--NADP+ reductase, subunit alpha n=2 Tax=Collinsella RepID=A4EBQ3_9ACTN
Ferredoxin--NADP+ reductase subunit alpha {ECO:0000313|EMBL:CDA36001.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L2_039_121G1_scaffold_151_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20018..21394
DNA (1377bp) protein (459aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EBA39014.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EBA39014.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBQ4_9ACTN
glutamate synthase (NADPH), homotetrameric
L2_039_121G1_scaffold_151_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21522..22145)
DNA (624bp) protein (208aa)
Conserved domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB92_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75803.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_151_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22194..22832)
DNA (639bp) protein (213aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBQ6_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39016.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L-aspartate ABC transporter membrane protein
L2_039_121G1_scaffold_151_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22836..23582)
DNA (747bp) protein (249aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBQ7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75801.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter permease
L2_039_121G1_scaffold_151_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23608..24483)
DNA (876bp) protein (292aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8H3_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA35180.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter substrate-binding protein
L2_039_121G1_scaffold_151_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24492..25223)
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF26_9ACTN
ABC transporter ATP-binding protein PEB1C {ECO:0000313|EMBL:KGI75799.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L-glutamate ABC transporter ATP-binding protein
L2_039_121G1_scaffold_151_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25595..26038)
DNA (444bp) protein (148aa)
YqeY-like protein n=2 Tax=Collinsella RepID=A4EBR0_9ACTN
YqeY-like protein {ECO:0000313|EMBL:CDA35178.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GatB/YqeY domain-containing protein
L2_039_121G1_scaffold_151_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26093..27313)
DNA (1221bp) protein (407aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PPIC-type PPIASE domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1W8_9ACTN
PpiC-type peptidyl-prolyl cis-trans isomerase
L2_039_121G1_scaffold_151_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27484..27948)
DNA (465bp) protein (155aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLN6_9ACTN
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EBA39022.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
putative PTS IIA-like nitrogen-regulatory protein PtsN
L2_039_121G1_scaffold_151_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28101..28802)
DNA (702bp) protein (234aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=2 Tax=Collinsella RepID=A4EBR3_9ACTN
L2_039_121G1_scaffold_151_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28792..29895)
DNA (1104bp) protein (368aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF20_9ACTN
L2_039_121G1_scaffold_151_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30053..31723)
DNA (1671bp) protein (557aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z618_9ACTN
Displaying items 1-30 of 66 in total

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