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L2_039_121G1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_156_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

286..1230
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65315.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_039_121G1_scaffold_156_2
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1400..1921
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77925.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative replication initiator protein
L2_039_121G1_scaffold_156_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1985..2590
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M1R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64915.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative plasmid replication protein
L2_039_121G1_scaffold_156_4
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2663..3868
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37630.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Site-specific recombinase XerD
L2_039_121G1_scaffold_156_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4029..4475
DNA (447bp) protein (149aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM48_9ACTN
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA35356.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_156_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4646..4975)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72585.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_156_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4968..5792)
DNA (825bp) protein (275aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Pyridoxal kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE3_9ACTN
L2_039_121G1_scaffold_156_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6341..6847
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE2_9ACTN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EBA39146.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
MarR family transcripitonal regulator
L2_039_121G1_scaffold_156_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6840..8663
DNA (1824bp) protein (608aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z960_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72654.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L2_039_121G1_scaffold_156_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8656..10575
DNA (1920bp) protein (640aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72653.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L2_039_121G1_scaffold_156_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10803..11711)
DNA (909bp) protein (303aa)
Transcriptional regulator LysR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNV1_9ACTN
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA36016.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LysR family transcriptional regulator
L2_039_121G1_scaffold_156_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11912..12793
DNA (882bp) protein (294aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.36)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4J7_9ACTN
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDA36017.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_156_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12860..14116
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC5_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39129.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_121G1_scaffold_156_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14186..15226
DNA (1041bp) protein (347aa)
NAD-dependent oxidoreductase (EC:1.1.1.179)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC4_9ACTN
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EBA39128.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_121G1_scaffold_156_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15445..17592
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D1Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72695.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_156_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17974..18678)
DNA (705bp) protein (235aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative translaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB7_9ACTN
L2_039_121G1_scaffold_156_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18890..19717)
DNA (828bp) protein (276aa)
HAD hydrolase family IIB n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQV7_9ACTN
HAD hydrolase family IIB {ECO:0000313|EMBL:CDA36751.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HAD-superfamily hydrolase, subfamily IIB
L2_039_121G1_scaffold_156_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19793..22360
DNA (2568bp) protein (856aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB5_9ACTN
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_039_121G1_scaffold_156_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22455..23168)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=2 Tax=Collinsella RepID=A4EBB4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72691.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_039_121G1_scaffold_156_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23173..24798)
DNA (1626bp) protein (542aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFZ3_9ACTN
L2_039_121G1_scaffold_156_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24913..25137)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3Y1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35847.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_121G1_scaffold_156_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25169..27196)
DNA (2028bp) protein (676aa)
Probable potassium transport system protein kup n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB1_9ACTN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
potassium transporter
L2_039_121G1_scaffold_156_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27355..28224)
DNA (870bp) protein (290aa)
Nitroreductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBB0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72713.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_156_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28439..30739
DNA (2301bp) protein (767aa)
Arylsulfatase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1R0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72712.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sulfatase
L2_039_121G1_scaffold_156_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31002..31553)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEW3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72710.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_121G1_scaffold_156_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31665..33524)
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA5_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39109.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_039_121G1_scaffold_156_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33525..35372)
DNA (1848bp) protein (616aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5V7_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35103.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L2_039_121G1_scaffold_156_28
Enterococcus raffinosus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35588..36637
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Enterococcus raffinosus ATCC 49464 RepID=R2R1Y2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH77675.1}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 49464.;"
L2_039_121G1_scaffold_156_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37537..39318)
DNA (1782bp) protein (594aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72707.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_039_121G1_scaffold_156_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(39462..40058)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72706.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator, TetR family
Displaying items 1-30 of 57 in total

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