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L2_039_121G1_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_184_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..437
DNA (435bp) protein (145aa)
Fructokinase {ECO:0000313|EMBL:KFI94495.1}; EC=2.7.1.4 {ECO:0000313|EMBL:KFI94495.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Fructokinase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RBT4_9BIFI
fructokinase
L2_039_121G1_scaffold_184_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

594..1892
DNA (1299bp) protein (433aa)
Uncharacterized conserved protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCS4_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI94494.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L2_039_121G1_scaffold_184_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1957..3189
DNA (1233bp) protein (411aa)
N-acylglucosamine 2-epimerase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV22_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31882.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
N-acylglucosamine 2-epimerase
L2_039_121G1_scaffold_184_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3259..5409)
DNA (2151bp) protein (717aa)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C2I6_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31883.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Beta-N-acetylhexosaminidase
L2_039_121G1_scaffold_184_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5547..7805)
DNA (2259bp) protein (753aa)
Beta-glucosidase n=2 Tax=Bifidobacterium longum RepID=E8MUK7_BIFL1
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31884.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
beta-glucosidase
L2_039_121G1_scaffold_184_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7947..9050)
DNA (1104bp) protein (368aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B834_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31885.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_184_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9145..9471)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI94489.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
L2_039_121G1_scaffold_184_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9468..9839)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F625CB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31886.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_184_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9820..11103)
DNA (1284bp) protein (428aa)
anaerobic sulfatase maturase n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B47B57
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31887.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
arylsulfatase regulator
L2_039_121G1_scaffold_184_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11171..12616)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F48E8
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31888.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
arylsulfatase A family protein
L2_039_121G1_scaffold_184_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12613..13479)
DNA (867bp) protein (289aa)
ABC transporter permease n=1 Tax=Streptomyces acidiscabies RepID=UPI0002892FCE
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31889.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease
L2_039_121G1_scaffold_184_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13479..14441)
DNA (963bp) protein (321aa)
ABC transporter permease n=1 Tax=Streptomyces acidiscabies RepID=UPI000289E3E2
MalF-type ABC sugar transport systems permease component {ECO:0000313|EMBL:KFI94484.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L2_039_121G1_scaffold_184_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14445..15746)
DNA (1302bp) protein (434aa)
ABC transporter substrate-binding protein n=1 Tax=Streptomyces acidiscabies RepID=UPI0002898E6E
Solute-binding protein of ABC transporter system {ECO:0000313|EMBL:KFI94483.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
solute-binding protein
L2_039_121G1_scaffold_184_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15947..17230)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILA3_BIFAP
Glycosyl hydrolase {ECO:0000313|EMBL:KFI94482.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
conserved hypothetical protein with glycosyl hydrolases family 35 domain
L2_039_121G1_scaffold_184_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17595..18893
DNA (1299bp) protein (433aa)
Major facilitator transporter n=1 Tax=Pseudomonas putida HB3267 RepID=L0FKK9_PSEPU
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31893.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
major facilitator transporter
L2_039_121G1_scaffold_184_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18959..19798
DNA (840bp) protein (280aa)
Beta-lactamase domain-containing protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S282_PROA4
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31894.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Beta-lactamase domain-containing protein
L2_039_121G1_scaffold_184_17
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20076..23222)
DNA (3147bp) protein (1049aa)
Glycosyl hydrolase family 38, N-terminal domain protein {ECO:0000313|EMBL:KFI86256.1}; EC=3.2.1.24 {ECO:0000313|EMBL:KFI86256.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Alpha-mannosidase n=2 Tax=Bifidobacterium longum RepID=V6XX52_BIFLN
alpha-mannosidase
L2_039_121G1_scaffold_184_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23448..26540)
DNA (3093bp) protein (1031aa)
Alpha-mannosidase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCR6_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31897.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
alpha-mannosidase
L2_039_121G1_scaffold_184_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26811..27638)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI0002DFD3D8
ABC transporter permease {ECO:0000313|EMBL:KFI94476.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Transporter
L2_039_121G1_scaffold_184_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27631..28647)
DNA (1017bp) protein (339aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C943_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31899.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease
L2_039_121G1_scaffold_184_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28647..29909)
DNA (1263bp) protein (421aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium breve RepID=UPI000380CD8F
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31900.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
extracellular solute-binding protein, family 1
L2_039_121G1_scaffold_184_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30335..30823)
DNA (489bp) protein (163aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Bifidobacterium longum RepID=F8AP91_BIFLN
D-tyrosyl-tRNA deacylase
L2_039_121G1_scaffold_184_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31664..32962)
DNA (1299bp) protein (433aa)
Cell division septal protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGW8_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31902.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ftsQ; cell division septal protein
L2_039_121G1_scaffold_184_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32962..34560)
DNA (1599bp) protein (533aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
UDP-N-acetylmuramate--L-alanine ligase n=3 Tax=root RepID=MURC_BIFAA
UDP-N-acetylmuramate--L-alanine ligase
L2_039_121G1_scaffold_184_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34681..35850)
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase n=1 Tax=Bifidobacterium breve RepID=UPI0002DBB634
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
L2_039_121G1_scaffold_184_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35986..37299)
DNA (1314bp) protein (438aa)
Cell division protein FtsW n=5 Tax=Bifidobacterium RepID=E3EMW7_BIFBS
Protein FtsW-like {ECO:0000313|EMBL:KFI93281.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
fstW; cell division protein FtsW
L2_039_121G1_scaffold_184_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37286..38719)
DNA (1434bp) protein (478aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUD1_9BIFI
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L2_039_121G1_scaffold_184_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38843..39943)
DNA (1101bp) protein (367aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=5 Tax=Bifidobacterium breve RepID=F6C8L4_BIFBA
Phospho-N-acetylmuramoyl-pentapeptide-transferase
L2_039_121G1_scaffold_184_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40010..41518)
DNA (1509bp) protein (503aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HVG5_BIFBI
murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L2_039_121G1_scaffold_184_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41546..42433)
DNA (888bp) protein (296aa)
UDP-N-acetylmuramyl tripeptide synthase n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=G0H6N1_BIFAN
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000313|EMBL:KFI93277.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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