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L2_039_121G1_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_191_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94..399)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z3V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42988.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_191_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

578..976
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z9W5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42990.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_191_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1131..2153
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AK97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42992.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_191_4
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2155..2940
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMR7_9CLOT
Putative nucleotidyltransferase {ECO:0000313|EMBL:KJJ68595.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_039_121G1_scaffold_191_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3091..3411
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42996.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, PadR family
L2_039_121G1_scaffold_191_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3404..4249
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z412_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43013.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted membrane protein
L2_039_121G1_scaffold_191_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4242..4775
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43015.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4907..5473
DNA (567bp) protein (189aa)
DegV family protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RVN4_9CLOT
DegV family protein {ECO:0000313|EMBL:CDC49419.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
DegV family protein
L2_039_121G1_scaffold_191_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5546..5740
DNA (195bp) protein (65aa)
DegV family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AKF6_9CLOT
DegV family protein {ECO:0000313|EMBL:CDD43032.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
degV family protein
L2_039_121G1_scaffold_191_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5774..6343
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z431_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43033.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
phosphatidylglycerophosphate synthase
L2_039_121G1_scaffold_191_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6459..7079
DNA (621bp) protein (207aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHZ5_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDD43034.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L2_039_121G1_scaffold_191_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7227..7712
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43035.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_121G1_scaffold_191_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7918..8706
DNA (789bp) protein (263aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPU0_9CLOT
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CDD43036.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8772..9761
DNA (990bp) protein (330aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z445_9CLOT
NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding {ECO:0000313|EMBL:CDD43048.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9926..10426
DNA (501bp) protein (167aa)
Acetolactate synthase, small (regulatory) subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZI09_9CLOT
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDD43049.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_16
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10500..11510
DNA (1011bp) protein (337aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Ketol-acid reductoisomerase n=4 Tax=Clostridiales RepID=D4MTL4_9FIRM
L2_039_121G1_scaffold_191_17
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11635..12528)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=D6DIE4_CLOSC
transcriptional regulator, LysR family
LysR substrate binding domain protein {ECO:0000313|EMBL:EFE14726.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_039_121G1_scaffold_191_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12686..13972
DNA (1287bp) protein (429aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027, ECO:0000313|EMBL:CBK77469.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIE5_CLOSC
L2_039_121G1_scaffold_191_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13974..14468
DNA (495bp) protein (165aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPZ3_9CLOT
L2_039_121G1_scaffold_191_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14465..14938
DNA (474bp) protein (158aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z484_9CLOT
ybaK/ebsC protein
L2_039_121G1_scaffold_191_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15291..16127
DNA (837bp) protein (279aa)
Cell Wall Hydrolase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA92_9CLOT
Cell Wall Hydrolase {ECO:0000313|EMBL:CDD43105.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cell Wall Hydrolase.
L2_039_121G1_scaffold_191_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16218..19169)
DNA (2952bp) protein (984aa)
Predicted Zn-dependent peptidases insulinase-like n=1 Tax=Clostridium sp. CAG:299 RepID=R7AKK8_9CLOT
Predicted Zn-dependent peptidases insulinase-like {ECO:0000313|EMBL:CDD43107.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_039_121G1_scaffold_191_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19382..20446
DNA (1065bp) protein (355aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZA97_9CLOT
Adenosine deaminase {ECO:0000313|EMBL:CDD43110.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20477..21130
DNA (654bp) protein (218aa)
Chloramphenicol O-acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z492_9CLOT
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:CDD43113.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21081..21653)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZI71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43114.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
TM2 domain.
L2_039_121G1_scaffold_191_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21634..22152)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIG6_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77490.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_039_121G1_scaffold_191_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22142..22519)
DNA (378bp) protein (126aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4A8_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CDD43133.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L2_039_121G1_scaffold_191_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22898..23356
DNA (459bp) protein (153aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQ28_9CLOT
Cytidine deaminase {ECO:0000313|EMBL:CDD43136.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_121G1_scaffold_191_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23826..25079
DNA (1254bp) protein (418aa)
Predicted permease n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4B4_9CLOT
Predicted permease {ECO:0000313|EMBL:CDD43138.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted permease
L2_039_121G1_scaffold_191_30
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25102..27399
DNA (2298bp) protein (766aa)
SpoIID/LytB domain n=2 Tax=Clostridium RepID=D6DIH1_CLOSC
SpoIID/LytB domain
SpoIID/LytB domain {ECO:0000313|EMBL:CCY85720.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Displaying items 1-30 of 63 in total

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