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L2_039_121G1_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_209_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..250
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=3 Tax=Bifidobacterium RepID=B6XSY6_9BIFI
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_039_121G1_scaffold_209_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


270..716
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSY7_9BIFI
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L2_039_121G1_scaffold_209_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2230..2547
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUT2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70135.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_039_121G1_scaffold_209_4
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2670..3398
DNA (729bp) protein (243aa)
MIP family channel protein n=2 Tax=Bifidobacterium RepID=C0BUT3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15487.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycerol uptake permease
L2_039_121G1_scaffold_209_5
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3606..3899
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUT4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15485.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L2_039_121G1_scaffold_209_6
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4162..4548
DNA (387bp) protein (129aa)
Membrane protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GVE9_9BIFI
Membrane protein {ECO:0000313|EMBL:CCY19779.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
membrane protein
L2_039_121G1_scaffold_209_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4595..5728)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTG6_9BIFI
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:KEF29248.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glutamyl-Q tRNA(Asp) ligase
L2_039_121G1_scaffold_209_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5879..6343
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUT8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70141.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
transposase
L2_039_121G1_scaffold_209_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6578..7402
DNA (825bp) protein (275aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUT9_9BIFI
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EEG70142.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04296.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_039_121G1_scaffold_209_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7493..8353
DNA (861bp) protein (287aa)
FAH family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU0_9BIFI
FAH family protein {ECO:0000313|EMBL:EEG70143.1}; Putative hydrolase {ECO:0000313|EMBL:BAR04295.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
L2_039_121G1_scaffold_209_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8588..11290
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTG3_9BIFI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ATPase AAA
L2_039_121G1_scaffold_209_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11445..12329)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU2_9BIFI
Copper-transporting ATPase {ECO:0000313|EMBL:KEF29243.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ATPase P
L2_039_121G1_scaffold_209_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12502..13836
DNA (1335bp) protein (445aa)
RmuC domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29242.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_039_121G1_scaffold_209_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14284..17244
DNA (2961bp) protein (987aa)
Bacterial group 2 Ig-like protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU5_9BIFI
Glycosyl hydrolase {ECO:0000313|EMBL:BAR04291.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
arabinosidase
L2_039_121G1_scaffold_209_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17425..23517
DNA (6093bp) protein (2031aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU7_9BIFI
Glycosyl hydrolase {ECO:0000313|EMBL:BAR04290.1}; Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEG70150.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_039_121G1_scaffold_209_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23770..24432
DNA (663bp) protein (221aa)
Orotate phosphoribosyltransferase domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU8_9BIFI
Orotate phosphoribosyltransferase domain protein {ECO:0000313|EMBL:EEG70151.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04289.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
orotate phosphoribosyltransferase
L2_039_121G1_scaffold_209_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24718..25668
DNA (951bp) protein (317aa)
RNA methyltransferase TrmH family n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P424_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29239.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
RNA methyltransferase
L2_039_121G1_scaffold_209_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26007..26345
DNA (339bp) protein (113aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=3 Tax=Bifidobacterium RepID=R6Q0H8_9BIFI
glutamyl-tRNA amidotransferase
L2_039_121G1_scaffold_209_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26347..27876
DNA (1530bp) protein (510aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PAA2_9BIFI
glutamyl-tRNA amidotransferase
L2_039_121G1_scaffold_209_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27902..29398
DNA (1497bp) protein (499aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Bifidobacterium RepID=C0BUV3_9BIFI
glutamyl-tRNA amidotransferase
L2_039_121G1_scaffold_209_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29709..30812
DNA (1104bp) protein (368aa)
Acetyltransferase, GNAT family n=2 Tax=Bifidobacterium RepID=C0BUV5_9BIFI
GNAT family acetyltransferase {ECO:0000313|EMBL:KEF29235.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
GNAT family acetyltransferase
L2_039_121G1_scaffold_209_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30812..31123
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B6XSW0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15162.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_039_121G1_scaffold_209_23
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31383..32972
DNA (1590bp) protein (530aa)
Amine oxidase (Flavin-containing) n=2 Tax=Bifidobacterium RepID=C0BUV7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15465.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_039_121G1_scaffold_209_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33272..35422
DNA (2151bp) protein (717aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Transcription termination factor Rho n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUV9_9BIFI
transcription termination factor Rho
L2_039_121G1_scaffold_209_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35890..36366
DNA (477bp) protein (159aa)
Transcriptional regulator, AsnC family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUW0_9BIFI
AsnC family transcriptional regulator {ECO:0000313|EMBL:KEF29231.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
AsnC family transcriptional regulator
L2_039_121G1_scaffold_209_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36391..36804
DNA (414bp) protein (138aa)
Chorismate mutase n=2 Tax=Bifidobacterium RepID=C0BUW1_9BIFI
Chorismate mutase {ECO:0000313|EMBL:KEF29230.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
chorismate mutase
L2_039_121G1_scaffold_209_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36903..39032
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUW3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04278.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_039_121G1_scaffold_209_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(39205..41991)
DNA (2787bp) protein (929aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
valS; valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUW4_9BIFI
L2_039_121G1_scaffold_209_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42120..43670)
DNA (1551bp) protein (517aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUW5_9BIFI
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEG70168.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter substrate-binding protein
L2_039_121G1_scaffold_209_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43725..44390)
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Endonuclease III n=2 Tax=Bifidobacterium RepID=C0BUW6_9BIFI
endonuclease III
Displaying items 1-30 of 41 in total

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